RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 SAMD9Q5K651 1589 aa15.57■□□□□ 0.08
PTPRN2-203ENST00000389418 ZBTB3Q9H5J0 574 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 ZNF518AQ6AHZ1 1483 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 BICD2Q8TD16 824 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 TMOD3Q9NYL9 352 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 LRRCC1Q9C099 1032 aa15.56■□□□□ 0.08
PTPRN2-203ENST00000389418 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 RABEP1Q15276 862 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 TNRQ92752 1358 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 SMARCA5O60264 1052 aaPredicted RBP15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 STARD3NLO95772 234 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 ZSCAN25Q6NSZ9 544 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 NUTM1Q86Y26 1132 aa15.55■□□□□ 0.08
PTPRN2-203ENST00000389418 AACSQ86V21 672 aa15.54■□□□□ 0.08
PTPRN2-203ENST00000389418 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
PTPRN2-203ENST00000389418 AEBP1Q8IUX7 1158 aa15.54■□□□□ 0.08
PTPRN2-203ENST00000389418 RARSP54136 660 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 STK3Q13188 491 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 ABCF2Q9UG63 623 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 CFAP43Q8NDM7 1665 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 ATP5J2-PTCD1G3V325 749 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 ACSBG1Q96GR2 724 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 A2MP01023 1474 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 LRRC59Q96AG4 307 aaKnown RBP15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 NACAP1Q9BZK3 213 aa15.53■□□□□ 0.08
PTPRN2-203ENST00000389418 RBM5P52756 815 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■■■□□ 15.2
PTPRN2-203ENST00000389418 TTC39AQ5SRH9 613 aa15.52■□□□□ 0.08
PTPRN2-203ENST00000389418 MYD88Q99836 296 aa15.52■□□□□ 0.08
PTPRN2-203ENST00000389418 KCNA6P17658 529 aa15.52■□□□□ 0.07
PTPRN2-203ENST00000389418 SLC39A6Q13433 755 aa15.52■□□□□ 0.07
PTPRN2-203ENST00000389418 ALDH1L2Q3SY69 923 aa15.52■□□□□ 0.07
PTPRN2-203ENST00000389418 ABCC10Q5T3U5 1492 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 CEBPZQ03701 1054 aaKnown RBP15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 CEP126Q9P2H0 1117 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 MAPKBP1O60336 1514 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 ANKRD1Q15327 319 aa15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 CCDC43Q96MW1 224 aaKnown RBP15.51■□□□□ 0.07
PTPRN2-203ENST00000389418 EXOC5O00471 708 aa15.5■□□□□ 0.07
PTPRN2-203ENST00000389418 IDH1O75874 414 aaKnown RBP15.5■□□□□ 0.07
PTPRN2-203ENST00000389418 ANKRD24Q8TF21 1146 aa15.5■□□□□ 0.07
PTPRN2-203ENST00000389418 PIBF1Q8WXW3 757 aa15.5■□□□□ 0.07
PTPRN2-203ENST00000389418 C8orf37Q96NL8 207 aa15.5■□□□□ 0.07
PTPRN2-203ENST00000389418 SASS6Q6UVJ0 657 aa15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 ZNF652Q9Y2D9 606 aa15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 PDIA4P13667 645 aaKnown RBP15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 LARP1Q6PKG0 1096 aaKnown RBP15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
PTPRN2-203ENST00000389418 DDX17Q92841 729 aaKnown RBP15.48■□□□□ 0.07
PTPRN2-203ENST00000389418 GOLGA6L1Q8N7Z2 621 aa15.48■□□□□ 0.07
PTPRN2-203ENST00000389418 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
PTPRN2-203ENST00000389418 CTNNA3Q9UI47 895 aa15.47■□□□□ 0.07
PTPRN2-203ENST00000389418 TRAK2O60296 914 aa15.47■□□□□ 0.07
PTPRN2-203ENST00000389418 ZSCAN29Q8IWY8 852 aaPredicted RBP15.47■□□□□ 0.07
PTPRN2-203ENST00000389418 MBD3O95983 291 aa15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 PUS7Q96PZ0 661 aaKnown RBP15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 UHRF1BP1LA0JNW5 1464 aa15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 TSHZ3Q63HK5 1081 aa15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 CCDC8Q9H0W5 538 aaPredicted RBP15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 RAI14Q9P0K7 980 aa15.46■□□□□ 0.07
PTPRN2-203ENST00000389418 HSP90AB3PQ58FF7 597 aa15.46■□□□□ 0.06
PTPRN2-203ENST00000389418 CCDC70Q6NSX1 233 aa15.46■□□□□ 0.06
PTPRN2-203ENST00000389418 BOLA2Q9H3K6 86 aa15.46■□□□□ 0.06
PTPRN2-203ENST00000389418 CYP46A1Q9Y6A2 500 aa15.46■□□□□ 0.06
PTPRN2-203ENST00000389418 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 NKTRP30414 1462 aaKnown RBP15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 METTL24Q5JXM2 366 aa15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 RNF214Q8ND24 703 aa15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 TRMT112Q9UI30 125 aaKnown RBP15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 RAB11FIP3O75154 756 aa15.45■□□□□ 0.06
PTPRN2-203ENST00000389418 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 ZPR1O75312 459 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 KRT32Q14532 448 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 A0A087WZG4 1122 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 IGHMBP2P38935 993 aaKnown RBP15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 LRP2BPQ9P2M1 347 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 LRRFIP2Q9Y608 721 aaKnown RBP15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 SHANK2Q9UPX8 1470 aa15.44■□□□□ 0.06
PTPRN2-203ENST00000389418 JMYQ8N9B5 988 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 NUP133Q8WUM0 1156 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 PCMTD1Q96MG8 357 aaPredicted RBP15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 AKAP2Q9Y2D5 859 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 PI4KAP2A4QPH2 592 aa15.43■□□□□ 0.06
PTPRN2-203ENST00000389418 PI4KAP1Q8N8J0 262 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms