RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 HOXC9P31274 260 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 ALDH1L2Q3SY69 923 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 ORAI2Q96SN7 254 aa11.2□□□□□ -0.62
GPNMB-202ENST00000381990 EYA1Q99502 592 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 RLBP1P12271 317 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 NFAT5O94916 1531 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 NCOA3Q9Y6Q9 1424 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 KIF16BQ96L93 1317 aa11.19□□□□□ -0.62
GPNMB-202ENST00000381990 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 MVPQ14764 893 aaKnown RBP11.18□□□□□ -0.62
GPNMB-202ENST00000381990 C22orf23Q9BZE7 217 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 LTN1O94822 1766 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
GPNMB-202ENST00000381990 KCNH5Q8NCM2 988 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 TNNQ9UQP3 1299 aa11.18□□□□□ -0.62
GPNMB-202ENST00000381990 FOXO3O43524 673 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 TRAK2O60296 914 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
GPNMB-202ENST00000381990 DCCP43146 1447 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 STRCP1A6NGW2 1772 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 TMEM94Q12767 1356 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 IPO8O15397 1037 aaKnown RBP11.17□□□□□ -0.62
GPNMB-202ENST00000381990 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
GPNMB-202ENST00000381990 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
GPNMB-202ENST00000381990 PTMSP20962 102 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 IP6K1Q92551 441 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
GPNMB-202ENST00000381990 VAMP4O75379 141 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 TRIM27P14373 513 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 HSPA2P54652 639 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
GPNMB-202ENST00000381990 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 NOB1Q9ULX3 412 aaKnown RBP11.16□□□□□ -0.62
GPNMB-202ENST00000381990 TRPM3Q9HCF6 1732 aaPredicted RBP11.16□□□□□ -0.62
GPNMB-202ENST00000381990 ATF3P18847 181 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 GAS2L2Q8NHY3 880 aa11.16□□□□□ -0.62
GPNMB-202ENST00000381990 SLIT3O75094 1523 aa11.15□□□□□ -0.62
GPNMB-202ENST00000381990 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
GPNMB-202ENST00000381990 MTHFSDQ2M296 383 aaKnown RBP11.15□□□□□ -0.62
GPNMB-202ENST00000381990 KRT28Q7Z3Y7 464 aa11.15□□□□□ -0.63
GPNMB-202ENST00000381990 TSPYL6Q8N831 410 aa11.15□□□□□ -0.63
GPNMB-202ENST00000381990 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.63
GPNMB-202ENST00000381990 MST1RQ04912 1400 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 CHL1O00533 1208 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
GPNMB-202ENST00000381990 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
GPNMB-202ENST00000381990 MCM10Q7L590 875 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
GPNMB-202ENST00000381990 SNX21Q969T3 373 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
GPNMB-202ENST00000381990 GRPEL1Q9HAV7 217 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 CRB1P82279 1406 aa11.14□□□□□ -0.63
GPNMB-202ENST00000381990 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 C8orf58Q8NAV2 365 aa11.13□□□□□ -0.63
GPNMB-202ENST00000381990 LTV1Q96GA3 475 aaPredicted RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
GPNMB-202ENST00000381990 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
GPNMB-202ENST00000381990 GCP02774 474 aa11.13□□□□□ -0.63
GPNMB-202ENST00000381990 HSP90AA1P07900 732 aaKnown RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
GPNMB-202ENST00000381990 PANK2Q9BZ23 570 aa11.13□□□□□ -0.63
GPNMB-202ENST00000381990 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 KIAA0232Q92628 1395 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 DDIT3P35638 169 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 ARHGAP45Q92619 1136 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 ELL2O00472 640 aaPredicted RBP11.12□□□□□ -0.63
GPNMB-202ENST00000381990 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
GPNMB-202ENST00000381990 ARHGEF25Q86VW2 580 aa11.12□□□□□ -0.63
GPNMB-202ENST00000381990 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
GPNMB-202ENST00000381990 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 SMC5Q8IY18 1101 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 GBP4Q96PP9 640 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 ESPNB1AK53 854 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 MSH6P52701 1360 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 HSP90AA2PQ14568 343 aaPredicted RBP11.11□□□□□ -0.63
GPNMB-202ENST00000381990 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
GPNMB-202ENST00000381990 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
GPNMB-202ENST00000381990 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
GPNMB-202ENST00000381990 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
GPNMB-202ENST00000381990 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
GPNMB-202ENST00000381990 TRIM44Q96DX7 344 aaPredicted RBP11.1□□□□□ -0.63
GPNMB-202ENST00000381990 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
GPNMB-202ENST00000381990 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
GPNMB-202ENST00000381990 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
GPNMB-202ENST00000381990 ARXQ96QS3 562 aa11.09□□□□□ -0.63
GPNMB-202ENST00000381990 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms