RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
SNPH-202ENST00000381873 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
SNPH-202ENST00000381873 ZSCAN25Q6NSZ9 544 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 CDK5RAP3Q96JB5 506 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 NFE2L2Q16236 605 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
SNPH-202ENST00000381873 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 RNF214Q8ND24 703 aa17.73■□□□□ 0.43
SNPH-202ENST00000381873 LRPPRCP42704 1394 aaKnown RBP17.73■□□□□ 0.43
SNPH-202ENST00000381873 CFAP74Q9C0B2 1584 aa17.72■□□□□ 0.43
SNPH-202ENST00000381873 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
SNPH-202ENST00000381873 RPAP2Q8IXW5 612 aaPredicted RBP17.71■□□□□ 0.43
SNPH-202ENST00000381873 FIBPO43427 364 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.43
SNPH-202ENST00000381873 PDILTQ8N807 584 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 ABCC11Q96J66 1382 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 PIP4K2BP78356 416 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 LETM1O95202 739 aaPredicted RBP17.71■□□□□ 0.43
SNPH-202ENST00000381873 AACSQ86V21 672 aa17.71■□□□□ 0.43
SNPH-202ENST00000381873 TMPOP42166 694 aaKnown RBP17.7■□□□□ 0.42
SNPH-202ENST00000381873 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
SNPH-202ENST00000381873 MRE11P49959 708 aa17.7■□□□□ 0.42
SNPH-202ENST00000381873 FMNL2Q96PY5 1086 aa17.7■□□□□ 0.42
SNPH-202ENST00000381873 STARD3NLO95772 234 aa17.7■□□□□ 0.42
SNPH-202ENST00000381873 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
SNPH-202ENST00000381873 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
SNPH-202ENST00000381873 ZFYVE27Q5T4F4 411 aa17.69■□□□□ 0.42
SNPH-202ENST00000381873 TRAK2O60296 914 aa17.69■□□□□ 0.42
SNPH-202ENST00000381873 CAVIN1Q6NZI2 390 aaKnown RBP17.69■□□□□ 0.42
SNPH-202ENST00000381873 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
SNPH-202ENST00000381873 KRT18P05783 430 aaKnown RBP17.69■□□□□ 0.42
SNPH-202ENST00000381873 FILIP1LQ4L180 1135 aa17.69■□□□□ 0.42
SNPH-202ENST00000381873 FAM43AQ8N2R8 423 aa17.69■□□□□ 0.42
SNPH-202ENST00000381873 PRPF40AO75400 957 aaKnown RBP17.68■□□□□ 0.42
SNPH-202ENST00000381873 CCDC173Q0VFZ6 552 aa17.68■□□□□ 0.42
SNPH-202ENST00000381873 CTNNA3Q9UI47 895 aa17.68■□□□□ 0.42
SNPH-202ENST00000381873 ATP7AQ04656 1500 aa17.68■□□□□ 0.42
SNPH-202ENST00000381873 BLOC1S2Q6QNY1 142 aa17.68■□□□□ 0.42
SNPH-202ENST00000381873 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
SNPH-202ENST00000381873 PIP4K2AP48426 406 aaPredicted RBP17.68■□□□□ 0.42
SNPH-202ENST00000381873 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.68■□□□□ 0.42
SNPH-202ENST00000381873 IL1RAPL2Q9NP60 686 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
SNPH-202ENST00000381873 CCDC184Q52MB2 194 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 ATP10AO60312 1499 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 CDR1P51861 262 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 TMEM132AQ24JP5 1023 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
SNPH-202ENST00000381873 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
SNPH-202ENST00000381873 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
SNPH-202ENST00000381873 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
SNPH-202ENST00000381873 RUFY1Q96T51 708 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 AEBP1Q8IUX7 1158 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
SNPH-202ENST00000381873 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 ABCA8O94911 1581 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNPH-202ENST00000381873 STK3Q13188 491 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 STK11IPQ8N1F8 1099 aa17.66■□□□□ 0.42
SNPH-202ENST00000381873 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 MAGEC2Q9UBF1 373 aaPredicted RBP17.65■□□□□ 0.42
SNPH-202ENST00000381873 NUP133Q8WUM0 1156 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 RAI14Q9P0K7 980 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 TDO2P48775 406 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
SNPH-202ENST00000381873 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
SNPH-202ENST00000381873 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
SNPH-202ENST00000381873 BICDL1Q6ZP65 573 aa17.64■□□□□ 0.41
SNPH-202ENST00000381873 TEX35Q5T0J7 233 aa17.64■□□□□ 0.41
SNPH-202ENST00000381873 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
SNPH-202ENST00000381873 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
SNPH-202ENST00000381873 UBAC1Q9BSL1 405 aa17.64■□□□□ 0.41
SNPH-202ENST00000381873 ACBD3Q9H3P7 528 aa17.64■□□□□ 0.41
SNPH-202ENST00000381873 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.41
SNPH-202ENST00000381873 SMC2O95347 1197 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 KRT32Q14532 448 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
SNPH-202ENST00000381873 WWC2Q6AWC2 1192 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 KRT85P78386 507 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 ME1P48163 572 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
SNPH-202ENST00000381873 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 FOXO3O43524 673 aa17.63■□□□□ 0.41
SNPH-202ENST00000381873 IDH1O75874 414 aaKnown RBP17.62■□□□□ 0.41
SNPH-202ENST00000381873 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
SNPH-202ENST00000381873 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
SNPH-202ENST00000381873 CDKL5O76039 1030 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
SNPH-202ENST00000381873 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms