RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 POTEJP0CG39 1038 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 DEKP35659 375 aaKnown RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 CCDC178Q5BJE1 867 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 CDC5LQ99459 802 aaKnown RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 PPP1R12BO60237 982 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 ERLIN2O94905 339 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 TDO2P48775 406 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 NAP1L1P55209 391 aaKnown RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 ZRSR2Q15696 482 aaKnown RBP8.48□□□□□ -1.05
CCDC171-201ENST00000380701 LRP2BPQ9P2M1 347 aa8.48□□□□□ -1.05
CCDC171-201ENST00000380701 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 RPGRQ92834 1020 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 SLC5A1P13866 664 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 IMMTQ16891 758 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 CCAR2Q8N163 923 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 PPP1R42Q7Z4L9 355 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 IFNL2Q8IZJ0 200 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 KIF1BPQ96EK5 621 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
CCDC171-201ENST00000380701 PUS7Q96PZ0 661 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 WDR33Q9C0J8 1336 aaKnown RBP8.47□□□□□ -1.05
CCDC171-201ENST00000380701 FOXD4L5Q5VV16 416 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 MNS1Q8NEH6 495 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 FOXD4L4Q8WXT5 416 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 AIDAQ96BJ3 306 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 CDCA7Q9BWT1 371 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 PDCL3Q9H2J4 239 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 FANCAO15360 1455 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 CBFA2T2O43439 604 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 GLRX3O76003 335 aaKnown RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 ZFYVE27Q5T4F4 411 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 U3KPZ7 1027 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 TTF1Q15361 905 aaPredicted RBP8.46□□□□□ -1.05
CCDC171-201ENST00000380701 CFAP45Q9UL16 551 aa8.46□□□□□ -1.05
CCDC171-201ENST00000380701 BLOC1S2Q6QNY1 142 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 CRACR2BQ8N4Y2 399 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-201ENST00000380701 CETN2P41208 172 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 ATP2B2Q01814 1243 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 CCDC12Q8WUD4 166 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-201ENST00000380701 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-201ENST00000380701 SEC63Q9UGP8 760 aaKnown RBP8.46□□□□□ -1.06
CCDC171-201ENST00000380701 ZNF76P36508 570 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 METTL24Q5JXM2 366 aa8.46□□□□□ -1.06
CCDC171-201ENST00000380701 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
CCDC171-201ENST00000380701 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 GSTO1P78417 241 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 CUL5Q93034 780 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 SRGAP3O43295 1099 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 ANKRD18BA2A2Z9 1011 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 B4DLN1 442 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 MRPL12P52815 198 aaKnown RBP8.45□□□□□ -1.06
CCDC171-201ENST00000380701 IFIT5Q13325 482 aaKnown RBP8.45□□□□□ -1.06
CCDC171-201ENST00000380701 NSD3Q9BZ95 1437 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
CCDC171-201ENST00000380701 AACSQ86V21 672 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 MVPQ14764 893 aaKnown RBP8.45□□□□□ -1.06
CCDC171-201ENST00000380701 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 NBPF14Q5TI25 921 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
CCDC171-201ENST00000380701 ZGPATQ8N5A5 531 aaKnown RBP8.45□□□□□ -1.06
CCDC171-201ENST00000380701 UHRF1BP1LA0JNW5 1464 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 MYO1BO43795 1136 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 KRT85P78386 507 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 ST5P78524 1137 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 BAG3O95817 575 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 CAVIN1Q6NZI2 390 aaKnown RBP8.44□□□□□ -1.06
CCDC171-201ENST00000380701 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 CIZ1Q9ULV3 898 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-201ENST00000380701 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 NEK4P51957 841 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-201ENST00000380701 PTPRCP08575 1304 aa8.44□□□□□ -1.06
CCDC171-201ENST00000380701 DZIP1Q86YF9 867 aaKnown RBP8.44□□□□□ -1.06
CCDC171-201ENST00000380701 FGFR1OPO95684 399 aaKnown RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 IQCEQ6IPM2 695 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 NOB1Q9ULX3 412 aaKnown RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 ANKRD36BQ8N2N9 1353 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 USP5P45974 858 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 UQCRFS1P1P0C7P4 283 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 MYL6BP14649 208 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 HDAC9Q9UKV0 1011 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 SCAF11Q99590 1463 aaKnown RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 HLA-DOAP06340 250 aa8.43□□□□□ -1.06
CCDC171-201ENST00000380701 DDX46Q7L014 1031 aaKnown RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 CTCFLQ8NI51 663 aaPredicted RBP8.43□□□□□ -1.06
CCDC171-201ENST00000380701 THOC2Q8NI27 1593 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms