RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
RFC3-201ENST00000380071 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
RFC3-201ENST00000380071 KIF13AQ9H1H9 1805 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 MAP3K19Q56UN5 1328 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 CDC45O75419 566 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 MTHFSDQ2M296 383 aaKnown RBP15.12■□□□□ 0.01
RFC3-201ENST00000380071 USP31Q70CQ4 1352 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 MEIS3Q99687 375 aa15.12■□□□□ 0.01
RFC3-201ENST00000380071 CRB1P82279 1406 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 APBB1O00213 710 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 SMARCA5O60264 1052 aaPredicted RBP15.11■□□□□ 0.01
RFC3-201ENST00000380071 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 MSH6P52701 1360 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 KIAA0232Q92628 1395 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 TOPAZ1Q8N9V7 1692 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
RFC3-201ENST00000380071 TTC22Q5TAA0 569 aa15.1■□□□□ 0.01
RFC3-201ENST00000380071 G2E3Q7L622 706 aa15.1■□□□□ 0.01
RFC3-201ENST00000380071 RPAP2Q8IXW5 612 aaPredicted RBP15.1■□□□□ 0.01
RFC3-201ENST00000380071 TNPO1Q92973 898 aaKnown RBP15.1■□□□□ 0.01
RFC3-201ENST00000380071 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
RFC3-201ENST00000380071 L1TD1Q5T7N2 865 aaKnown RBP15.09■□□□□ 0.01
RFC3-201ENST00000380071 RTL1A6NKG5 1358 aa15.09■□□□□ 0.01
RFC3-201ENST00000380071 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
RFC3-201ENST00000380071 PTPRCP08575 1304 aa15.09■□□□□ 0.01
RFC3-201ENST00000380071 F6X3S4 739 aa15.08■□□□□ 0.01
RFC3-201ENST00000380071 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0.01
RFC3-201ENST00000380071 FSD2A1L4K1 749 aa15.08■□□□□ 0
RFC3-201ENST00000380071 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
RFC3-201ENST00000380071 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
RFC3-201ENST00000380071 NALCNQ8IZF0 1738 aa15.08■□□□□ 0
RFC3-201ENST00000380071 GOLGA6L3A6NEY3 463 aa15.07■□□□□ 0
RFC3-201ENST00000380071 SLC4A10Q6U841 1118 aa15.07■□□□□ 0
RFC3-201ENST00000380071 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
RFC3-201ENST00000380071 RTF1Q92541 710 aaKnown RBP15.07■□□□□ 0
RFC3-201ENST00000380071 EYA1Q99502 592 aa15.07■□□□□ 0
RFC3-201ENST00000380071 RIMS1Q86UR5 1692 aaKnown RBP15.07■□□□□ 0
RFC3-201ENST00000380071 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
RFC3-201ENST00000380071 EID1Q9Y6B2 187 aa15.07■□□□□ 0
RFC3-201ENST00000380071 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
RFC3-201ENST00000380071 GAS2L2Q8NHY3 880 aa15.06■□□□□ 0
RFC3-201ENST00000380071 ARHGEF10O15013 1369 aa15.06■□□□□ 0
RFC3-201ENST00000380071 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
RFC3-201ENST00000380071 SDSP20132 328 aa15.06■□□□□ 0
RFC3-201ENST00000380071 AMPHP49418 695 aa15.06■□□□□ 0
RFC3-201ENST00000380071 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
RFC3-201ENST00000380071 TTC21AQ8NDW8 1320 aa15.06■□□□□ 0
RFC3-201ENST00000380071 FAM43AQ8N2R8 423 aa15.05■□□□□ 0
RFC3-201ENST00000380071 USP26Q9BXU7 913 aa15.05■□□□□ 0
RFC3-201ENST00000380071 PANK2Q9BZ23 570 aa15.05■□□□□ -0
RFC3-201ENST00000380071 SBNO1A3KN83 1393 aa15.05■□□□□ -0
RFC3-201ENST00000380071 FLT4P35916 1363 aa15.05■□□□□ -0
RFC3-201ENST00000380071 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
RFC3-201ENST00000380071 NUTM2GQ5VZR2 741 aa15.04■□□□□ -0
RFC3-201ENST00000380071 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
RFC3-201ENST00000380071 TBX22Q9Y458 520 aa15.03■□□□□ -0
RFC3-201ENST00000380071 NLRP6P59044 892 aa15.03■□□□□ -0
RFC3-201ENST00000380071 IGSF1Q8N6C5 1336 aa15.03■□□□□ -0
RFC3-201ENST00000380071 KDRP35968 1356 aa15.03■□□□□ -0
RFC3-201ENST00000380071 NECTIN2Q92692 538 aa15.02■□□□□ -0
RFC3-201ENST00000380071 SSFA2P28290 1259 aa15.02□□□□□ -0.01
RFC3-201ENST00000380071 GBP4Q96PP9 640 aa15.02□□□□□ -0.01
RFC3-201ENST00000380071 FMN2Q9NZ56 1722 aa15.01□□□□□ -0.01
RFC3-201ENST00000380071 CCT4P50991 539 aaKnown RBP15.01□□□□□ -0.01
RFC3-201ENST00000380071 RABEP1Q15276 862 aa15.01□□□□□ -0.01
RFC3-201ENST00000380071 HMMRO75330 724 aa15□□□□□ -0.01
RFC3-201ENST00000380071 RRAGDQ9NQL2 400 aaPredicted RBP15□□□□□ -0.01
RFC3-201ENST00000380071 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
RFC3-201ENST00000380071 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
RFC3-201ENST00000380071 LTV1Q96GA3 475 aaPredicted RBP14.99□□□□□ -0.01
RFC3-201ENST00000380071 STK31Q9BXU1 1019 aa14.99□□□□□ -0.01
RFC3-201ENST00000380071 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 HOXC9P31274 260 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 TSHZ3Q63HK5 1081 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 PIK3C2AO00443 1686 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 GNAI2P04899 355 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 PDE1AP54750 535 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 FLIIQ13045 1269 aa14.98□□□□□ -0.01
RFC3-201ENST00000380071 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
RFC3-201ENST00000380071 AK9Q5TCS8 1911 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
RFC3-201ENST00000380071 MRE11P49959 708 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 ARHGAP23Q9P227 1491 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 PNMA6EA0A0J9YXQ4 647 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 KCNA6P17658 529 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 GAS2L3Q86XJ1 694 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 GRPEL1Q9HAV7 217 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 SLIT1O75093 1534 aa14.97□□□□□ -0.01
RFC3-201ENST00000380071 HTATSF1O43719 755 aaKnown RBP14.96□□□□□ -0.01
RFC3-201ENST00000380071 CCDC30Q5VVM6 783 aa14.96□□□□□ -0.01
RFC3-201ENST00000380071 OSBPL3Q9H4L5 887 aa14.96□□□□□ -0.01
RFC3-201ENST00000380071 ABTB2Q8N961 1025 aa14.96□□□□□ -0.01
RFC3-201ENST00000380071 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms