RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 ANKRD45Q5TZF3 282 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 USHBP1Q8N6Y0 703 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 CRB1P82279 1406 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 SIRT2Q8IXJ6 389 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 TSPYL4Q9UJ04 414 aa24.24■■□□□ 1.47
PCDHA4-201ENST00000378125 DEKP35659 375 aaKnown RBP24.23■■□□□ 1.47
PCDHA4-201ENST00000378125 UPF2Q9HAU5 1272 aaKnown RBP24.23■■□□□ 1.47
PCDHA4-201ENST00000378125 CHD1LQ86WJ1 897 aa24.23■■□□□ 1.47
PCDHA4-201ENST00000378125 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
PCDHA4-201ENST00000378125 KDRP35968 1356 aa24.21■■□□□ 1.47
PCDHA4-201ENST00000378125 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
PCDHA4-201ENST00000378125 XPCQ01831 940 aaPredicted RBP24.2■■□□□ 1.46
PCDHA4-201ENST00000378125 CHMP4BQ9H444 224 aaKnown RBP24.2■■□□□ 1.46
PCDHA4-201ENST00000378125 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
PCDHA4-201ENST00000378125 PSME1Q06323 249 aa24.19■■□□□ 1.46
PCDHA4-201ENST00000378125 MARF1Q9Y4F3 1742 aaKnown RBP24.19■■□□□ 1.46
PCDHA4-201ENST00000378125 GAS2L2Q8NHY3 880 aa24.18■■□□□ 1.46
PCDHA4-201ENST00000378125 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
PCDHA4-201ENST00000378125 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
PCDHA4-201ENST00000378125 NECTIN2Q92692 538 aa24.17■■□□□ 1.46
PCDHA4-201ENST00000378125 G2E3Q7L622 706 aa24.16■■□□□ 1.46
PCDHA4-201ENST00000378125 GCC1Q96CN9 775 aa24.15■■□□□ 1.46
PCDHA4-201ENST00000378125 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
PCDHA4-201ENST00000378125 SETD1BQ9UPS6 1966 aaKnown RBP24.15■■□□□ 1.46
PCDHA4-201ENST00000378125 RGS12O14924 1447 aa24.15■■□□□ 1.46
PCDHA4-201ENST00000378125 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
PCDHA4-201ENST00000378125 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.45
PCDHA4-201ENST00000378125 INTS3Q68E01 1043 aaKnown RBP24.14■■□□□ 1.45
PCDHA4-201ENST00000378125 F6X3S4 739 aa24.13■■□□□ 1.45
PCDHA4-201ENST00000378125 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
PCDHA4-201ENST00000378125 SLC4A10Q6U841 1118 aa24.13■■□□□ 1.45
PCDHA4-201ENST00000378125 NFKBIBQ15653 356 aa24.12■■□□□ 1.45
PCDHA4-201ENST00000378125 MSH6P52701 1360 aa24.12■■□□□ 1.45
PCDHA4-201ENST00000378125 IL17REQ8NFR9 667 aa24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 C22orf23Q9BZE7 217 aa24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 MEIS3Q99687 375 aa24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 SLKQ9H2G2 1235 aaPredicted RBP24.11■■□□□ 1.45
PCDHA4-201ENST00000378125 BECN1Q14457 450 aa24.1■■□□□ 1.45
PCDHA4-201ENST00000378125 ADAMTSL3P82987 1691 aa24.1■■□□□ 1.45
PCDHA4-201ENST00000378125 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
PCDHA4-201ENST00000378125 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
PCDHA4-201ENST00000378125 APBB1O00213 710 aa24.09■■□□□ 1.45
PCDHA4-201ENST00000378125 NBPF6Q5VWK0 638 aa24.09■■□□□ 1.45
PCDHA4-201ENST00000378125 NBPF4Q96M43 638 aa24.09■■□□□ 1.45
PCDHA4-201ENST00000378125 PTPRCP08575 1304 aa24.09■■□□□ 1.45
PCDHA4-201ENST00000378125 LTN1O94822 1766 aa24.08■■□□□ 1.45
PCDHA4-201ENST00000378125 SPRYD3Q8NCJ5 442 aa24.07■■□□□ 1.44
PCDHA4-201ENST00000378125 IP6K1Q92551 441 aa24.07■■□□□ 1.44
PCDHA4-201ENST00000378125 LRRC59Q96AG4 307 aaKnown RBP24.07■■□□□ 1.44
PCDHA4-201ENST00000378125 KIF24Q5T7B8 1368 aa24.07■■□□□ 1.44
PCDHA4-201ENST00000378125 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
PCDHA4-201ENST00000378125 TBC1D2Q9BYX2 928 aa24.06■■□□□ 1.44
PCDHA4-201ENST00000378125 USP35Q9P2H5 1018 aa24.06■■□□□ 1.44
PCDHA4-201ENST00000378125 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
PCDHA4-201ENST00000378125 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
PCDHA4-201ENST00000378125 CEP85Q6P2H3 762 aa24.05■■□□□ 1.44
PCDHA4-201ENST00000378125 STK31Q9BXU1 1019 aa24.05■■□□□ 1.44
PCDHA4-201ENST00000378125 BMP2KLQ5H9B9 411 aa24.04■■□□□ 1.44
PCDHA4-201ENST00000378125 PROSER2Q86WR7 435 aaPredicted RBP24.04■■□□□ 1.44
PCDHA4-201ENST00000378125 ANKRD44Q8N8A2 993 aa24.04■■□□□ 1.44
PCDHA4-201ENST00000378125 DCTPP1Q9H773 170 aa24.04■■□□□ 1.44
PCDHA4-201ENST00000378125 RTL1A6NKG5 1358 aa24.03■■□□□ 1.44
PCDHA4-201ENST00000378125 FRAT2O75474 233 aaPredicted RBP24.03■■□□□ 1.44
PCDHA4-201ENST00000378125 ATP10DQ9P241 1426 aa24.03■■□□□ 1.44
PCDHA4-201ENST00000378125 TAF7Q15545 349 aaPredicted RBP24.02■■□□□ 1.44
PCDHA4-201ENST00000378125 USP54Q70EL1 1684 aa24.02■■□□□ 1.44
PCDHA4-201ENST00000378125 SMARCA5O60264 1052 aaPredicted RBP24.02■■□□□ 1.44
PCDHA4-201ENST00000378125 LGR6Q9HBX8 967 aa24.02■■□□□ 1.44
PCDHA4-201ENST00000378125 NFAT5O94916 1531 aa24.02■■□□□ 1.44
PCDHA4-201ENST00000378125 FKBP5Q13451 457 aaPredicted RBP24.01■■□□□ 1.43
PCDHA4-201ENST00000378125 GCP02774 474 aa24■■□□□ 1.43
PCDHA4-201ENST00000378125 KCNH5Q8NCM2 988 aa24■■□□□ 1.43
PCDHA4-201ENST00000378125 FLIIQ13045 1269 aa24■■□□□ 1.43
PCDHA4-201ENST00000378125 CCDC30Q5VVM6 783 aa24■■□□□ 1.43
PCDHA4-201ENST00000378125 RPAP2Q8IXW5 612 aaPredicted RBP24■■□□□ 1.43
PCDHA4-201ENST00000378125 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
PCDHA4-201ENST00000378125 PLEKHM2Q8IWE5 1019 aa23.98■■□□□ 1.43
PCDHA4-201ENST00000378125 TBC1D9Q6ZT07 1266 aa23.98■■□□□ 1.43
PCDHA4-201ENST00000378125 LRRC37A3O60309 1634 aa23.97■■□□□ 1.43
PCDHA4-201ENST00000378125 RGPD2P0DJD1 1756 aa23.97■■□□□ 1.43
PCDHA4-201ENST00000378125 GSPT1P15170 499 aaKnown RBP23.97■■□□□ 1.43
PCDHA4-201ENST00000378125 EIF2S2P20042 333 aaKnown RBP23.96■■□□□ 1.43
PCDHA4-201ENST00000378125 CCT4P50991 539 aaKnown RBP23.96■■□□□ 1.43
PCDHA4-201ENST00000378125 MPRIPQ6WCQ1 1025 aa23.95■■□□□ 1.43
PCDHA4-201ENST00000378125 KRT28Q7Z3Y7 464 aa23.95■■□□□ 1.43
PCDHA4-201ENST00000378125 DDX17Q92841 729 aaKnown RBP23.95■■□□□ 1.42
PCDHA4-201ENST00000378125 KCNQ3O43525 872 aa23.94■■□□□ 1.42
PCDHA4-201ENST00000378125 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
PCDHA4-201ENST00000378125 HDGFL1Q5TGJ6 251 aa23.94■■□□□ 1.42
PCDHA4-201ENST00000378125 ZNF530Q6P9A1 599 aaPredicted RBP23.94■■□□□ 1.42
PCDHA4-201ENST00000378125 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
PCDHA4-201ENST00000378125 AXIN2Q9Y2T1 843 aa23.93■■□□□ 1.42
PCDHA4-201ENST00000378125 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
PCDHA4-201ENST00000378125 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
PCDHA4-201ENST00000378125 ANTXR1Q9H6X2 564 aa23.92■■□□□ 1.42
PCDHA4-201ENST00000378125 FAM208AQ9UK61 1670 aaKnown RBP23.9■■□□□ 1.42
PCDHA4-201ENST00000378125 GNAI2P04899 355 aa23.9■■□□□ 1.42
PCDHA4-201ENST00000378125 TTC22Q5TAA0 569 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms