RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 G2E3Q7L622 706 aa10.11□□□□□ -0.79
CKAP2-203ENST00000378037 NEXMIFQ5QGS0 1516 aa10.11□□□□□ -0.79
CKAP2-203ENST00000378037 MVPQ14764 893 aaKnown RBP10.11□□□□□ -0.79
CKAP2-203ENST00000378037 TTC5Q8N0Z6 440 aa10.11□□□□□ -0.79
CKAP2-203ENST00000378037 ANKRD36BQ8N2N9 1353 aa10.11□□□□□ -0.79
CKAP2-203ENST00000378037 LGR6Q9HBX8 967 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 ASXL1Q8IXJ9 1541 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 ROBO2Q9HCK4 1378 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 SURF6O75683 361 aaKnown RBP10.1□□□□□ -0.79
CKAP2-203ENST00000378037 BECN1Q14457 450 aa10.1□□□□□ -0.79
CKAP2-203ENST00000378037 KCNQ3O43525 872 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 ERICH6BQ5W0A0 696 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 ATP5J2-PTCD1G3V325 749 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 MEIS3Q99687 375 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 MS4A1P11836 297 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 BACH2Q9BYV9 841 aa10.09□□□□□ -0.79
CKAP2-203ENST00000378037 FOSBP53539 338 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 NKTRP30414 1462 aaKnown RBP10.08□□□□□ -0.8
CKAP2-203ENST00000378037 MYOM2P54296 1465 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 FGD1P98174 961 aa10.08□□□□□ -0.8
CKAP2-203ENST00000378037 PHAXQ9H814 394 aaKnown RBP10.08□□□□□ -0.8
CKAP2-203ENST00000378037 WDR63Q8IWG1 891 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 HSCBQ8IWL3 235 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 OTUD7AQ8TE49 926 aaPredicted RBP10.07□□□□□ -0.8
CKAP2-203ENST00000378037 ANKRD24Q8TF21 1146 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
CKAP2-203ENST00000378037 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 EIF5BO60841 1220 aaKnown RBP10.06□□□□□ -0.8
CKAP2-203ENST00000378037 TAF7Q15545 349 aaPredicted RBP10.06□□□□□ -0.8
CKAP2-203ENST00000378037 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 GCP02774 474 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 NEUROD6Q96NK8 337 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
CKAP2-203ENST00000378037 UBTFL1P0CB47 393 aaPredicted RBP10.06□□□□□ -0.8
CKAP2-203ENST00000378037 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
CKAP2-203ENST00000378037 FRAT2O75474 233 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-203ENST00000378037 BICDL1Q6ZP65 573 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 ZBTB3Q9H5J0 574 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 PI4KAP2A4QPH2 592 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 KCNQ4P56696 695 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 PI4KAP1Q8N8J0 262 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 COL22A1Q8NFW1 1626 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-203ENST00000378037 DLC1Q96QB1 1528 aa10.05□□□□□ -0.8
CKAP2-203ENST00000378037 API5Q9BZZ5 524 aaKnown RBP10.05□□□□□ -0.8
CKAP2-203ENST00000378037 ANO8Q9HCE9 1232 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-203ENST00000378037 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
CKAP2-203ENST00000378037 SRGAP3O43295 1099 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
CKAP2-203ENST00000378037 IL13P35225 146 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 GORABQ5T7V8 394 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 CHPF2Q9P2E5 772 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 GPTP24298 496 aa10.04□□□□□ -0.8
CKAP2-203ENST00000378037 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
CKAP2-203ENST00000378037 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
CKAP2-203ENST00000378037 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
CKAP2-203ENST00000378037 KLHDC4Q8TBB5 520 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 TOPAZ1Q8N9V7 1692 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 CABP4P57796 275 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 CASC1Q6TDU7 716 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 VAMP4O75379 141 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 C22orf23Q9BZE7 217 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 CRYBG1Q9Y4K1 1723 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 PIK3R4Q99570 1358 aa10.03□□□□□ -0.8
CKAP2-203ENST00000378037 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.8
CKAP2-203ENST00000378037 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
CKAP2-203ENST00000378037 HOXC9P31274 260 aa10.02□□□□□ -0.81
CKAP2-203ENST00000378037 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
CKAP2-203ENST00000378037 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
CKAP2-203ENST00000378037 NDUFB9Q9Y6M9 179 aa10.02□□□□□ -0.81
CKAP2-203ENST00000378037 UPF3BQ9BZI7 483 aaKnown RBP10.02□□□□□ -0.81
CKAP2-203ENST00000378037 HMMRO75330 724 aa10.01□□□□□ -0.81
CKAP2-203ENST00000378037 FLIIQ13045 1269 aa10.01□□□□□ -0.81
CKAP2-203ENST00000378037 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
CKAP2-203ENST00000378037 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
CKAP2-203ENST00000378037 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
CKAP2-203ENST00000378037 SHPRHQ149N8 1683 aa10.01□□□□□ -0.81
CKAP2-203ENST00000378037 PIK3C2GO75747 1445 aa10□□□□□ -0.81
CKAP2-203ENST00000378037 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
CKAP2-203ENST00000378037 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
CKAP2-203ENST00000378037 TECPR2O15040 1411 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms