RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
SF1-205ENST00000377394 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
SF1-205ENST00000377394 CIZ1Q9ULV3 898 aaPredicted RBP17.13■□□□□ 0.33
SF1-205ENST00000377394 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
SF1-205ENST00000377394 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
SF1-205ENST00000377394 RGS12O14924 1447 aa17.13■□□□□ 0.33
SF1-205ENST00000377394 OFD1O75665 1012 aa17.12■□□□□ 0.33
SF1-205ENST00000377394 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
SF1-205ENST00000377394 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
SF1-205ENST00000377394 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
SF1-205ENST00000377394 ROBO2Q9HCK4 1378 aa17.12■□□□□ 0.33
SF1-205ENST00000377394 CHL1O00533 1208 aa17.11■□□□□ 0.33
SF1-205ENST00000377394 CDC45O75419 566 aa17.11■□□□□ 0.33
SF1-205ENST00000377394 KRT24Q2M2I5 525 aa17.11■□□□□ 0.33
SF1-205ENST00000377394 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
SF1-205ENST00000377394 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
SF1-205ENST00000377394 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
SF1-205ENST00000377394 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
SF1-205ENST00000377394 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
SF1-205ENST00000377394 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
SF1-205ENST00000377394 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
SF1-205ENST00000377394 OVOS2A0A0J9YW53 1432 aa17.09■□□□□ 0.33
SF1-205ENST00000377394 OVOS2Q6IE36 1432 aa17.09■□□□□ 0.33
SF1-205ENST00000377394 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
SF1-205ENST00000377394 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
SF1-205ENST00000377394 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
SF1-205ENST00000377394 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
SF1-205ENST00000377394 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
SF1-205ENST00000377394 MCM10Q7L590 875 aa17.08■□□□□ 0.32
SF1-205ENST00000377394 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
SF1-205ENST00000377394 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 ACEP12821 1306 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
SF1-205ENST00000377394 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
SF1-205ENST00000377394 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
SF1-205ENST00000377394 TNRQ92752 1358 aa17.06■□□□□ 0.32
SF1-205ENST00000377394 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
SF1-205ENST00000377394 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
SF1-205ENST00000377394 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
SF1-205ENST00000377394 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
SF1-205ENST00000377394 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
SF1-205ENST00000377394 CRB1P82279 1406 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
SF1-205ENST00000377394 PTPRCP08575 1304 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 OTUD7AQ8TE49 926 aaPredicted RBP17.05■□□□□ 0.32
SF1-205ENST00000377394 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
SF1-205ENST00000377394 ZHX1Q9UKY1 873 aaPredicted RBP17.05■□□□□ 0.32
SF1-205ENST00000377394 USP6P35125 1406 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 MSH6P52701 1360 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
SF1-205ENST00000377394 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
SF1-205ENST00000377394 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
SF1-205ENST00000377394 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SF1-205ENST00000377394 MEIS3Q99687 375 aa17.03■□□□□ 0.32
SF1-205ENST00000377394 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
SF1-205ENST00000377394 SSH2Q76I76 1423 aa17.02■□□□□ 0.32
SF1-205ENST00000377394 UQCRHLA0A096LP55 91 aa17.02■□□□□ 0.31
SF1-205ENST00000377394 NUTM2FA1L443 756 aa17.02■□□□□ 0.31
SF1-205ENST00000377394 UQCRHP07919 91 aa17.02■□□□□ 0.31
SF1-205ENST00000377394 RABEP1Q15276 862 aa17.01■□□□□ 0.31
SF1-205ENST00000377394 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
SF1-205ENST00000377394 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
SF1-205ENST00000377394 SLC4A2P04920 1241 aa17■□□□□ 0.31
SF1-205ENST00000377394 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
SF1-205ENST00000377394 ARHGEF10O15013 1369 aa17■□□□□ 0.31
SF1-205ENST00000377394 SDSP20132 328 aa17■□□□□ 0.31
SF1-205ENST00000377394 SSFA2P28290 1259 aa17■□□□□ 0.31
SF1-205ENST00000377394 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
SF1-205ENST00000377394 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
SF1-205ENST00000377394 FOXO3O43524 673 aa16.99■□□□□ 0.31
SF1-205ENST00000377394 LTKP29376 864 aa16.99■□□□□ 0.31
SF1-205ENST00000377394 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.99■□□□□ 0.31
SF1-205ENST00000377394 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
SF1-205ENST00000377394 PTMSP20962 102 aa16.99■□□□□ 0.31
SF1-205ENST00000377394 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
SF1-205ENST00000377394 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
SF1-205ENST00000377394 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
SF1-205ENST00000377394 PTPRUQ92729 1446 aa16.98■□□□□ 0.31
SF1-205ENST00000377394 TERF1P54274 439 aa16.98■□□□□ 0.31
SF1-205ENST00000377394 G2E3Q7L622 706 aa16.98■□□□□ 0.31
SF1-205ENST00000377394 SOX12O15370 315 aa16.97■□□□□ 0.31
SF1-205ENST00000377394 APBB1O00213 710 aa16.97■□□□□ 0.31
SF1-205ENST00000377394 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
SF1-205ENST00000377394 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.31
SF1-205ENST00000377394 KDRP35968 1356 aa16.96■□□□□ 0.31
SF1-205ENST00000377394 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
SF1-205ENST00000377394 F6X3S4 739 aa16.95■□□□□ 0.3
SF1-205ENST00000377394 RIMS1Q86UR5 1692 aaKnown RBP16.95■□□□□ 0.3
SF1-205ENST00000377394 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
SF1-205ENST00000377394 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms