RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
CPT1A-202ENST00000376618 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
CPT1A-202ENST00000376618 AKAP12Q02952 1782 aa17.6■□□□□ 0.41
CPT1A-202ENST00000376618 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
CPT1A-202ENST00000376618 GSE1Q14687 1217 aa17.6■□□□□ 0.41
CPT1A-202ENST00000376618 BRPF3Q9ULD4 1205 aa17.59■□□□□ 0.41
CPT1A-202ENST00000376618 BECN1Q14457 450 aa17.59■□□□□ 0.41
CPT1A-202ENST00000376618 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.41
CPT1A-202ENST00000376618 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.41
CPT1A-202ENST00000376618 CD2BP2O95400 341 aaKnown RBP17.58■□□□□ 0.4
CPT1A-202ENST00000376618 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.4
CPT1A-202ENST00000376618 BRPF1P55201 1214 aaPredicted RBP17.57■□□□□ 0.4
CPT1A-202ENST00000376618 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
CPT1A-202ENST00000376618 ARHGAP45Q92619 1136 aa17.57■□□□□ 0.4
CPT1A-202ENST00000376618 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
CPT1A-202ENST00000376618 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
CPT1A-202ENST00000376618 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
CPT1A-202ENST00000376618 MSH6P52701 1360 aa17.56■□□□□ 0.4
CPT1A-202ENST00000376618 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
CPT1A-202ENST00000376618 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
CPT1A-202ENST00000376618 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
CPT1A-202ENST00000376618 API5Q9BZZ5 524 aaKnown RBP17.55■□□□□ 0.4
CPT1A-202ENST00000376618 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
CPT1A-202ENST00000376618 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
CPT1A-202ENST00000376618 HOXC9P31274 260 aa17.54■□□□□ 0.4
CPT1A-202ENST00000376618 GZF1Q9H116 711 aaPredicted RBP17.54■□□□□ 0.4
CPT1A-202ENST00000376618 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
CPT1A-202ENST00000376618 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
CPT1A-202ENST00000376618 LRRC59Q96AG4 307 aaKnown RBP17.53■□□□□ 0.4
CPT1A-202ENST00000376618 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
CPT1A-202ENST00000376618 RGS12O14924 1447 aa17.53■□□□□ 0.4
CPT1A-202ENST00000376618 CRB1P82279 1406 aa17.53■□□□□ 0.4
CPT1A-202ENST00000376618 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
CPT1A-202ENST00000376618 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.4
CPT1A-202ENST00000376618 GCC1Q96CN9 775 aa17.52■□□□□ 0.4
CPT1A-202ENST00000376618 CEP85Q6P2H3 762 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 NRKQ7Z2Y5 1582 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 ANXA1P04083 346 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 FLT4P35916 1363 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 KIF2CQ99661 725 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 EXOC6BQ9Y2D4 811 aa17.51■□□□□ 0.39
CPT1A-202ENST00000376618 ZBTB22O15209 634 aa17.5■□□□□ 0.39
CPT1A-202ENST00000376618 INTS3Q68E01 1043 aaKnown RBP17.5■□□□□ 0.39
CPT1A-202ENST00000376618 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
CPT1A-202ENST00000376618 LGR6Q9HBX8 967 aa17.5■□□□□ 0.39
CPT1A-202ENST00000376618 DIP2AQ14689 1571 aa17.5■□□□□ 0.39
CPT1A-202ENST00000376618 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
CPT1A-202ENST00000376618 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
CPT1A-202ENST00000376618 KCNQ3O43525 872 aa17.49■□□□□ 0.39
CPT1A-202ENST00000376618 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
CPT1A-202ENST00000376618 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
CPT1A-202ENST00000376618 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
CPT1A-202ENST00000376618 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
CPT1A-202ENST00000376618 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
CPT1A-202ENST00000376618 SBNO1A3KN83 1393 aa17.48■□□□□ 0.39
CPT1A-202ENST00000376618 TOPAZ1Q8N9V7 1692 aa17.48■□□□□ 0.39
CPT1A-202ENST00000376618 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
CPT1A-202ENST00000376618 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
CPT1A-202ENST00000376618 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
CPT1A-202ENST00000376618 DDX17Q92841 729 aaKnown RBP17.47■□□□□ 0.39
CPT1A-202ENST00000376618 PHF8Q9UPP1 1060 aa17.47■□□□□ 0.39
CPT1A-202ENST00000376618 GNAT3A8MTJ3 354 aa17.46■□□□□ 0.39
CPT1A-202ENST00000376618 PSME1Q06323 249 aa17.46■□□□□ 0.39
CPT1A-202ENST00000376618 ANKRD44Q8N8A2 993 aa17.46■□□□□ 0.39
CPT1A-202ENST00000376618 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
CPT1A-202ENST00000376618 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
CPT1A-202ENST00000376618 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
CPT1A-202ENST00000376618 HSCBQ8IWL3 235 aa17.45■□□□□ 0.38
CPT1A-202ENST00000376618 FER1L4A9Z1Z3 1794 aa17.44■□□□□ 0.38
CPT1A-202ENST00000376618 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
CPT1A-202ENST00000376618 FLIIQ13045 1269 aa17.44■□□□□ 0.38
CPT1A-202ENST00000376618 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
CPT1A-202ENST00000376618 SDSP20132 328 aa17.43■□□□□ 0.38
CPT1A-202ENST00000376618 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
CPT1A-202ENST00000376618 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
CPT1A-202ENST00000376618 SLIT1O75093 1534 aa17.43■□□□□ 0.38
CPT1A-202ENST00000376618 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
CPT1A-202ENST00000376618 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
CPT1A-202ENST00000376618 KDRP35968 1356 aa17.42■□□□□ 0.38
CPT1A-202ENST00000376618 RGPD1P0DJD0 1748 aa17.42■□□□□ 0.38
CPT1A-202ENST00000376618 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
CPT1A-202ENST00000376618 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
CPT1A-202ENST00000376618 STK31Q9BXU1 1019 aa17.41■□□□□ 0.38
CPT1A-202ENST00000376618 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
CPT1A-202ENST00000376618 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
CPT1A-202ENST00000376618 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
CPT1A-202ENST00000376618 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
CPT1A-202ENST00000376618 MAP4K4O95819 1239 aaPredicted RBP17.39■□□□□ 0.37
CPT1A-202ENST00000376618 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
CPT1A-202ENST00000376618 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.37
CPT1A-202ENST00000376618 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
CPT1A-202ENST00000376618 PTPRCP08575 1304 aa17.39■□□□□ 0.37
CPT1A-202ENST00000376618 CDC45O75419 566 aa17.39■□□□□ 0.37
CPT1A-202ENST00000376618 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
CPT1A-202ENST00000376618 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.37
CPT1A-202ENST00000376618 MCM4P33991 863 aa17.38■□□□□ 0.37
CPT1A-202ENST00000376618 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
CPT1A-202ENST00000376618 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
CPT1A-202ENST00000376618 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
CPT1A-202ENST00000376618 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms