RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CCT4P50991 539 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 ANKRD36BQ8N2N9 1353 aa14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 CABP4P57796 275 aa14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 DHX16O60231 1041 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 RABEP1Q15276 862 aa14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
NPLOC4-202ENST00000374747 PRPF40AO75400 957 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 CAGE1Q8TC20 777 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 PKNOX2Q96KN3 472 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 PLEKHH1Q9ULM0 1364 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 SAMD9LQ8IVG5 1584 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 CROCC2H7BZ55 1655 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 MAST1Q9Y2H9 1570 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 CCDC191Q8NCU4 936 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 GNAT3A8MTJ3 354 aa14.65□□□□□ -0.06
NPLOC4-202ENST00000374747 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 ADCY10Q96PN6 1610 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 NEO1Q92859 1461 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 KINO60870 393 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 EMILIN1Q9Y6C2 1016 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 ATP10AO60312 1499 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 GNAI2P04899 355 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 CNTROBQ8N137 903 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 PDCP20941 246 aa14.64□□□□□ -0.07
NPLOC4-202ENST00000374747 ARHGEF5Q12774 1597 aa14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 NEK4P51957 841 aa14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 RBM10P98175 930 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 RAD21O60216 631 aa14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
NPLOC4-202ENST00000374747 TTC21BQ7Z4L5 1316 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 FOXO3O43524 673 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 SMC2O95347 1197 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 ZMYM3Q14202 1370 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 OFD1O75665 1012 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 CT47A1Q5JQC4 288 aaPredicted RBP14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 LEKR1Q6ZMV7 388 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 TRIM34Q9BYJ4 488 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 ACEP12821 1306 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 COL17A1Q9UMD9 1497 aaPredicted RBP14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 DUSP27Q5VZP5 1158 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 KIF6Q6ZMV9 814 aa14.62□□□□□ -0.07
NPLOC4-202ENST00000374747 MAGI2Q86UL8 1455 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 VPS37DQ86XT2 251 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 CLASRPQ8N2M8 674 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■■□ 25
NPLOC4-202ENST00000374747 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 ASXL1Q8IXJ9 1541 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 SURF6O75683 361 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 AMOTQ4VCS5 1084 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 XBP1P17861 261 aa14.61□□□□□ -0.07
NPLOC4-202ENST00000374747 DHX8Q14562 1220 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 SMARCE1Q969G3 411 aa14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 GRPEL1Q9HAV7 217 aa14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 MYO6Q9UM54 1294 aa14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 WASHC4Q2M389 1173 aa14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 CDC42BPBQ9Y5S2 1711 aa14.6□□□□□ -0.07
NPLOC4-202ENST00000374747 TTLL5Q6EMB2 1281 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 FIBPO43427 364 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 ERC1Q8IUD2 1116 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 EPS15P42566 896 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 FILIP1LQ4L180 1135 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 CCDC43Q96MW1 224 aaKnown RBP14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 NEUROD6Q96NK8 337 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
NPLOC4-202ENST00000374747 CTDP1Q9Y5B0 961 aaPredicted RBP14.58□□□□□ -0.07
NPLOC4-202ENST00000374747 TTC37Q6PGP7 1564 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 ODF2Q5BJF6 829 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 CCDC192P0DO97 292 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.08
NPLOC4-202ENST00000374747 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 SPC24Q8NBT2 197 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 RBM33Q96EV2 1170 aaKnown RBP14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 ZNF396Q96N95 335 aaPredicted RBP14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 FMNL2Q96PY5 1086 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 TSPYL1Q9H0U9 437 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 C1orf115Q9H7X2 142 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 CCDC112Q8NEF3 446 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 MCM10Q7L590 875 aa14.57□□□□□ -0.08
NPLOC4-202ENST00000374747 HIP1O00291 1037 aa14.56□□□□□ -0.08
NPLOC4-202ENST00000374747 FYB1O15117 783 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms