RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ACEP12821 1306 aa22.29■■□□□ 1.16
PHF1-201ENST00000374512 OVOS2A0A0J9YW53 1432 aa22.29■■□□□ 1.16
PHF1-201ENST00000374512 OVOS2Q6IE36 1432 aa22.29■■□□□ 1.16
PHF1-201ENST00000374512 GZF1Q9H116 711 aaPredicted RBP22.29■■□□□ 1.16
PHF1-201ENST00000374512 DIP2AQ14689 1571 aa22.29■■□□□ 1.16
PHF1-201ENST00000374512 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
PHF1-201ENST00000374512 EIF4A2Q14240 407 aaKnown RBP22.27■■□□□ 1.16
PHF1-201ENST00000374512 AMOTL2Q9Y2J4 779 aa22.27■■□□□ 1.16
PHF1-201ENST00000374512 NALCNQ8IZF0 1738 aa22.27■■□□□ 1.16
PHF1-201ENST00000374512 USP6P35125 1406 aa22.27■■□□□ 1.16
PHF1-201ENST00000374512 HSP90AA1P07900 732 aaKnown RBP22.26■■□□□ 1.15
PHF1-201ENST00000374512 KIAA0232Q92628 1395 aa22.26■■□□□ 1.15
PHF1-201ENST00000374512 CLEC17AQ6ZS10 378 aa22.26■■□□□ 1.15
PHF1-201ENST00000374512 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
PHF1-201ENST00000374512 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
PHF1-201ENST00000374512 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
PHF1-201ENST00000374512 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
PHF1-201ENST00000374512 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
PHF1-201ENST00000374512 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
PHF1-201ENST00000374512 GRPEL1Q9HAV7 217 aa22.24■■□□□ 1.15
PHF1-201ENST00000374512 ANKRD44Q8N8A2 993 aa22.23■■□□□ 1.15
PHF1-201ENST00000374512 RABEP1Q15276 862 aa22.23■■□□□ 1.15
PHF1-201ENST00000374512 AEBP1Q8IUX7 1158 aa22.23■■□□□ 1.15
PHF1-201ENST00000374512 RRAGDQ9NQL2 400 aaPredicted RBP22.23■■□□□ 1.15
PHF1-201ENST00000374512 PTPRCP08575 1304 aa22.23■■□□□ 1.15
PHF1-201ENST00000374512 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
PHF1-201ENST00000374512 NUTM2FA1L443 756 aa22.22■■□□□ 1.15
PHF1-201ENST00000374512 CHL1O00533 1208 aa22.22■■□□□ 1.15
PHF1-201ENST00000374512 TTC22Q5TAA0 569 aa22.22■■□□□ 1.15
PHF1-201ENST00000374512 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
PHF1-201ENST00000374512 RGPD1P0DJD0 1748 aa22.22■■□□□ 1.15
PHF1-201ENST00000374512 PEAK1Q9H792 1746 aa22.22■■□□□ 1.15
PHF1-201ENST00000374512 GOLGA6L22H0YM25 854 aa22.21■■□□□ 1.15
PHF1-201ENST00000374512 GSPT1P15170 499 aaKnown RBP22.21■■□□□ 1.15
PHF1-201ENST00000374512 XRN1Q8IZH2 1706 aaKnown RBP22.2■■□□□ 1.14
PHF1-201ENST00000374512 SSH2Q76I76 1423 aa22.2■■□□□ 1.14
PHF1-201ENST00000374512 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
PHF1-201ENST00000374512 CD2BP2O95400 341 aaKnown RBP22.19■■□□□ 1.14
PHF1-201ENST00000374512 PANK2Q9BZ23 570 aa22.19■■□□□ 1.14
PHF1-201ENST00000374512 RGS12O14924 1447 aa22.19■■□□□ 1.14
PHF1-201ENST00000374512 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
PHF1-201ENST00000374512 CLCN1P35523 988 aa22.18■■□□□ 1.14
PHF1-201ENST00000374512 HSP90AB2PQ58FF8 381 aa22.18■■□□□ 1.14
PHF1-201ENST00000374512 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
PHF1-201ENST00000374512 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
PHF1-201ENST00000374512 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
PHF1-201ENST00000374512 FMN2Q9NZ56 1722 aa22.16■■□□□ 1.14
PHF1-201ENST00000374512 IBTKQ9P2D0 1353 aaPredicted RBP22.16■■□□□ 1.14
PHF1-201ENST00000374512 RGPD8O14715 1765 aaPredicted RBP22.16■■□□□ 1.14
PHF1-201ENST00000374512 CEP85Q6P2H3 762 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 USP26Q9BXU7 913 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 ARHGEF10O15013 1369 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 MCM10Q7L590 875 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 GAS2L2Q8NHY3 880 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 ARXQ96QS3 562 aa22.15■■□□□ 1.14
PHF1-201ENST00000374512 NUCB2P80303 420 aa22.14■■□□□ 1.14
PHF1-201ENST00000374512 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.14
PHF1-201ENST00000374512 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
PHF1-201ENST00000374512 CWC22Q9HCG8 908 aaKnown RBP22.12■■□□□ 1.13
PHF1-201ENST00000374512 HMMRO75330 724 aa22.12■■□□□ 1.13
PHF1-201ENST00000374512 MAP3K19Q56UN5 1328 aa22.12■■□□□ 1.13
PHF1-201ENST00000374512 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
PHF1-201ENST00000374512 FLT4P35916 1363 aa22.12■■□□□ 1.13
PHF1-201ENST00000374512 SOX12O15370 315 aa22.11■■□□□ 1.13
PHF1-201ENST00000374512 KLHL40Q2TBA0 621 aa22.11■■□□□ 1.13
PHF1-201ENST00000374512 ANKARQ7Z5J8 1434 aa22.11■■□□□ 1.13
PHF1-201ENST00000374512 CRB1P82279 1406 aa22.11■■□□□ 1.13
PHF1-201ENST00000374512 NGDNQ8NEJ9 315 aaKnown RBP22.11■■□□□ 1.13
PHF1-201ENST00000374512 REC8O95072 547 aa22.1■■□□□ 1.13
PHF1-201ENST00000374512 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
PHF1-201ENST00000374512 MSH6P52701 1360 aa22.1■■□□□ 1.13
PHF1-201ENST00000374512 SSFA2P28290 1259 aa22.1■■□□□ 1.13
PHF1-201ENST00000374512 BAG4O95429 457 aaKnown RBP22.09■■□□□ 1.13
PHF1-201ENST00000374512 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
PHF1-201ENST00000374512 ST18O60284 1047 aa22.08■■□□□ 1.13
PHF1-201ENST00000374512 KCNA6P17658 529 aa22.08■■□□□ 1.13
PHF1-201ENST00000374512 SDSP20132 328 aa22.08■■□□□ 1.13
PHF1-201ENST00000374512 CCT4P50991 539 aaKnown RBP22.08■■□□□ 1.13
PHF1-201ENST00000374512 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
PHF1-201ENST00000374512 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
PHF1-201ENST00000374512 KDRP35968 1356 aa22.08■■□□□ 1.12
PHF1-201ENST00000374512 GAS2L3Q86XJ1 694 aa22.07■■□□□ 1.12
PHF1-201ENST00000374512 RTF1Q92541 710 aaKnown RBP22.07■■□□□ 1.12
PHF1-201ENST00000374512 CYP2E1P05181 493 aaPredicted RBP22.06■■□□□ 1.12
PHF1-201ENST00000374512 PIK3C2AO00443 1686 aa22.06■■□□□ 1.12
PHF1-201ENST00000374512 AMPHP49418 695 aa22.06■■□□□ 1.12
PHF1-201ENST00000374512 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
PHF1-201ENST00000374512 TRIM44Q96DX7 344 aaPredicted RBP22.06■■□□□ 1.12
PHF1-201ENST00000374512 ESPNB1AK53 854 aa22.05■■□□□ 1.12
PHF1-201ENST00000374512 SLC4A2P04920 1241 aa22.05■■□□□ 1.12
PHF1-201ENST00000374512 MEIS3Q99687 375 aa22.05■■□□□ 1.12
PHF1-201ENST00000374512 ZNF142P52746 1687 aaPredicted RBP22.05■■□□□ 1.12
PHF1-201ENST00000374512 IGSF1Q8N6C5 1336 aa22.04■■□□□ 1.12
PHF1-201ENST00000374512 ERC2O15083 957 aa22.04■■□□□ 1.12
PHF1-201ENST00000374512 DDX49Q9Y6V7 483 aaKnown RBP22.04■■□□□ 1.12
PHF1-201ENST00000374512 CHD2O14647 1828 aaKnown RBP22.04■■□□□ 1.12
PHF1-201ENST00000374512 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
PHF1-201ENST00000374512 CCDC173Q0VFZ6 552 aa22.02■■□□□ 1.12
PHF1-201ENST00000374512 ANKLE2Q86XL3 938 aa22.02■■□□□ 1.12
PHF1-201ENST00000374512 OTUD7AQ8TE49 926 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms