RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
HMGCL-203ENST00000374490 NGLY1Q96IV0 654 aa17.61■□□□□ 0.41
HMGCL-203ENST00000374490 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
HMGCL-203ENST00000374490 NME9Q86XW9 330 aa17.61■□□□□ 0.41
HMGCL-203ENST00000374490 TMEM57Q8N5G2 664 aa17.61■□□□□ 0.41
HMGCL-203ENST00000374490 TBC1D32Q96NH3 1257 aa17.61■□□□□ 0.41
HMGCL-203ENST00000374490 NGDNQ8NEJ9 315 aaKnown RBP17.6■□□□□ 0.41
HMGCL-203ENST00000374490 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
HMGCL-203ENST00000374490 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
HMGCL-203ENST00000374490 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
HMGCL-203ENST00000374490 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
HMGCL-203ENST00000374490 SEC24BO95487 1268 aa17.58■□□□□ 0.41
HMGCL-203ENST00000374490 ZNF853P0CG23 659 aa17.58■□□□□ 0.41
HMGCL-203ENST00000374490 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.41
HMGCL-203ENST00000374490 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
HMGCL-203ENST00000374490 VAMP4O75379 141 aa17.56■□□□□ 0.4
HMGCL-203ENST00000374490 HMOX1P09601 288 aa17.56■□□□□ 0.4
HMGCL-203ENST00000374490 HAP1P54257 671 aaPredicted RBP17.56■□□□□ 0.4
HMGCL-203ENST00000374490 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
HMGCL-203ENST00000374490 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
HMGCL-203ENST00000374490 RGS12O14924 1447 aa17.56■□□□□ 0.4
HMGCL-203ENST00000374490 KIF24Q5T7B8 1368 aa17.56■□□□□ 0.4
HMGCL-203ENST00000374490 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
HMGCL-203ENST00000374490 NPHP3Q7Z494 1330 aa17.55■□□□□ 0.4
HMGCL-203ENST00000374490 ESCO1Q5FWF5 840 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 USP21Q9UK80 565 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 SSH2Q76I76 1423 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 OVOS2A0A0J9YW53 1432 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 OVOS2Q6IE36 1432 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 NUCB1Q02818 461 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 GSE1Q14687 1217 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
HMGCL-203ENST00000374490 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
HMGCL-203ENST00000374490 TRPC5Q9UL62 973 aaPredicted RBP17.53■□□□□ 0.4
HMGCL-203ENST00000374490 ABCC4O15439 1325 aa17.52■□□□□ 0.4
HMGCL-203ENST00000374490 MBIPQ9NS73 344 aa17.52■□□□□ 0.4
HMGCL-203ENST00000374490 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
HMGCL-203ENST00000374490 FBLN1P23142 703 aa17.5■□□□□ 0.39
HMGCL-203ENST00000374490 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-203ENST00000374490 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-203ENST00000374490 PIK3C2AO00443 1686 aa17.5■□□□□ 0.39
HMGCL-203ENST00000374490 ZBTB7BO15156 539 aaPredicted RBP17.5■□□□□ 0.39
HMGCL-203ENST00000374490 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
HMGCL-203ENST00000374490 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
HMGCL-203ENST00000374490 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
HMGCL-203ENST00000374490 USP31Q70CQ4 1352 aa17.48■□□□□ 0.39
HMGCL-203ENST00000374490 FOXO3O43524 673 aa17.48■□□□□ 0.39
HMGCL-203ENST00000374490 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
HMGCL-203ENST00000374490 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
HMGCL-203ENST00000374490 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
HMGCL-203ENST00000374490 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
HMGCL-203ENST00000374490 TSPYL6Q8N831 410 aa17.47■□□□□ 0.39
HMGCL-203ENST00000374490 TBC1D2Q9BYX2 928 aa17.47■□□□□ 0.39
HMGCL-203ENST00000374490 KIF1AQ12756 1690 aa17.46■□□□□ 0.39
HMGCL-203ENST00000374490 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.39
HMGCL-203ENST00000374490 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
HMGCL-203ENST00000374490 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
HMGCL-203ENST00000374490 KIAA0232Q92628 1395 aa17.45■□□□□ 0.38
HMGCL-203ENST00000374490 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
HMGCL-203ENST00000374490 MFAP1P55081 439 aaKnown RBP17.45■□□□□ 0.38
HMGCL-203ENST00000374490 ANTXR1Q9H6X2 564 aa17.45■□□□□ 0.38
HMGCL-203ENST00000374490 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
HMGCL-203ENST00000374490 ATRNO75882 1429 aa17.45■□□□□ 0.38
HMGCL-203ENST00000374490 PXDNQ92626 1479 aa17.44■□□□□ 0.38
HMGCL-203ENST00000374490 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 RBM25P49756 843 aaKnown RBP17.43■□□□□ 0.38
HMGCL-203ENST00000374490 NLRP6P59044 892 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 PSME1Q06323 249 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 ABTB2Q8N961 1025 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 C8orf58Q8NAV2 365 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 LNPKQ9C0E8 428 aa17.43■□□□□ 0.38
HMGCL-203ENST00000374490 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
HMGCL-203ENST00000374490 CHL1O00533 1208 aa17.42■□□□□ 0.38
HMGCL-203ENST00000374490 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
HMGCL-203ENST00000374490 MARF1Q9Y4F3 1742 aaKnown RBP17.42■□□□□ 0.38
HMGCL-203ENST00000374490 SOX12O15370 315 aa17.41■□□□□ 0.38
HMGCL-203ENST00000374490 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
HMGCL-203ENST00000374490 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
HMGCL-203ENST00000374490 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
HMGCL-203ENST00000374490 PTPRCP08575 1304 aa17.4■□□□□ 0.38
HMGCL-203ENST00000374490 ANKRD45Q5TZF3 282 aa17.4■□□□□ 0.38
HMGCL-203ENST00000374490 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
HMGCL-203ENST00000374490 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
HMGCL-203ENST00000374490 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
HMGCL-203ENST00000374490 SNX21Q969T3 373 aa17.39■□□□□ 0.38
HMGCL-203ENST00000374490 GJD4Q96KN9 370 aaPredicted RBP17.39■□□□□ 0.38
HMGCL-203ENST00000374490 SPATA31A3Q5VYP0 1347 aa17.39■□□□□ 0.37
HMGCL-203ENST00000374490 FAM83GA6ND36 823 aa17.39■□□□□ 0.37
HMGCL-203ENST00000374490 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
HMGCL-203ENST00000374490 FLT4P35916 1363 aa17.38■□□□□ 0.37
HMGCL-203ENST00000374490 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
HMGCL-203ENST00000374490 NUTM2GQ5VZR2 741 aa17.38■□□□□ 0.37
HMGCL-203ENST00000374490 CCDC125Q86Z20 511 aa17.38■□□□□ 0.37
HMGCL-203ENST00000374490 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
HMGCL-203ENST00000374490 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
HMGCL-203ENST00000374490 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
HMGCL-203ENST00000374490 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
HMGCL-203ENST00000374490 AMPHP49418 695 aa17.36■□□□□ 0.37
HMGCL-203ENST00000374490 CRB1P82279 1406 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms