RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CEP85Q6P2H3 762 aa14.08□□□□□ -0.15
PTPN20-204ENST00000374346 REC8O95072 547 aa14.08□□□□□ -0.16
PTPN20-204ENST00000374346 AEBP1Q8IUX7 1158 aa14.08□□□□□ -0.16
PTPN20-204ENST00000374346 RTF1Q92541 710 aaKnown RBP14.08□□□□□ -0.16
PTPN20-204ENST00000374346 ATP10DQ9P241 1426 aa14.08□□□□□ -0.16
PTPN20-204ENST00000374346 CD2BP2O95400 341 aaKnown RBP14.07□□□□□ -0.16
PTPN20-204ENST00000374346 NUCB2P80303 420 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 OVOS2A0A0J9YW53 1432 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 OVOS2Q6IE36 1432 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 PLEKHG3A1L390 1219 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 ST18O60284 1047 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 MCM10Q7L590 875 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 PANK2Q9BZ23 570 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 ACEP12821 1306 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 RTL1A6NKG5 1358 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 MSH6P52701 1360 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 TNRQ92752 1358 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 TMEM2Q9UHN6 1383 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 NALCNQ8IZF0 1738 aa14.07□□□□□ -0.16
PTPN20-204ENST00000374346 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
PTPN20-204ENST00000374346 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
PTPN20-204ENST00000374346 RRAGDQ9NQL2 400 aaPredicted RBP14.06□□□□□ -0.16
PTPN20-204ENST00000374346 RGS12O14924 1447 aa14.06□□□□□ -0.16
PTPN20-204ENST00000374346 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
PTPN20-204ENST00000374346 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
PTPN20-204ENST00000374346 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
PTPN20-204ENST00000374346 USP6P35125 1406 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
PTPN20-204ENST00000374346 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 CWC22Q9HCG8 908 aaKnown RBP14.05□□□□□ -0.16
PTPN20-204ENST00000374346 RGPD1P0DJD0 1748 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 UBR1Q8IWV7 1749 aa14.05□□□□□ -0.16
PTPN20-204ENST00000374346 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
PTPN20-204ENST00000374346 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
PTPN20-204ENST00000374346 SDSP20132 328 aa14.04□□□□□ -0.16
PTPN20-204ENST00000374346 CLCN1P35523 988 aa14.04□□□□□ -0.16
PTPN20-204ENST00000374346 HSP90AB2PQ58FF8 381 aa14.04□□□□□ -0.16
PTPN20-204ENST00000374346 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
PTPN20-204ENST00000374346 TTC21AQ8NDW8 1320 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 SSFA2P28290 1259 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 KRT24Q2M2I5 525 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 KLHL40Q2TBA0 621 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 MEIS3Q99687 375 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
PTPN20-204ENST00000374346 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 FMN2Q9NZ56 1722 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 CRB1P82279 1406 aa14.03□□□□□ -0.16
PTPN20-204ENST00000374346 BAG4O95429 457 aaKnown RBP14.02□□□□□ -0.16
PTPN20-204ENST00000374346 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.16
PTPN20-204ENST00000374346 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-204ENST00000374346 APBB1O00213 710 aa14.02□□□□□ -0.17
PTPN20-204ENST00000374346 ERC2O15083 957 aa14.02□□□□□ -0.17
PTPN20-204ENST00000374346 PEAK1Q9H792 1746 aa14.02□□□□□ -0.17
PTPN20-204ENST00000374346 SLC4A10Q6U841 1118 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 OSBPL3Q9H4L5 887 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 FLT4P35916 1363 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 PLEKHG1Q9ULL1 1385 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 AK9Q5TCS8 1911 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 ADAMTS13Q76LX8 1427 aa14.01□□□□□ -0.17
PTPN20-204ENST00000374346 SMARCA5O60264 1052 aaPredicted RBP14□□□□□ -0.17
PTPN20-204ENST00000374346 GNAI2P04899 355 aa14□□□□□ -0.17
PTPN20-204ENST00000374346 SBNO1A3KN83 1393 aa14□□□□□ -0.17
PTPN20-204ENST00000374346 CACNA1FO60840 1977 aa14□□□□□ -0.17
PTPN20-204ENST00000374346 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
PTPN20-204ENST00000374346 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
PTPN20-204ENST00000374346 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 MAP3K19Q56UN5 1328 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 SOX12O15370 315 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 GNAI3P08754 354 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 MCCP23508 829 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 AMPHP49418 695 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 MTHFSDQ2M296 383 aaKnown RBP13.99□□□□□ -0.17
PTPN20-204ENST00000374346 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
PTPN20-204ENST00000374346 KDRP35968 1356 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 ESPNB1AK53 854 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 MCM2P49736 904 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 CCDC173Q0VFZ6 552 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 CCDC30Q5VVM6 783 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
PTPN20-204ENST00000374346 PDE1AP54750 535 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 MCTP1Q6DN14 999 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 GAS2L3Q86XJ1 694 aa13.98□□□□□ -0.17
PTPN20-204ENST00000374346 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
PTPN20-204ENST00000374346 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
PTPN20-204ENST00000374346 SSH2Q76I76 1423 aa13.97□□□□□ -0.17
PTPN20-204ENST00000374346 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
PTPN20-204ENST00000374346 LRRCC1Q9C099 1032 aa13.97□□□□□ -0.17
PTPN20-204ENST00000374346 CYP2E1P05181 493 aaPredicted RBP13.96□□□□□ -0.17
PTPN20-204ENST00000374346 F6X3S4 739 aa13.96□□□□□ -0.18
PTPN20-204ENST00000374346 SRCIN1Q9C0H9 1055 aa13.96□□□□□ -0.18
PTPN20-204ENST00000374346 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
PTPN20-204ENST00000374346 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-204ENST00000374346 NAP1L5Q96NT1 182 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-204ENST00000374346 FOXO3O43524 673 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms