RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TNPO1Q92973 898 aaKnown RBP23.77■■□□□ 1.4
TMEM53-202ENST00000372237 K7ELQ4 463 aaPredicted RBP23.77■■□□□ 1.4
TMEM53-202ENST00000372237 CHL1O00533 1208 aa23.77■■□□□ 1.4
TMEM53-202ENST00000372237 CD2BP2O95400 341 aaKnown RBP23.77■■□□□ 1.4
TMEM53-202ENST00000372237 MCM10Q7L590 875 aa23.77■■□□□ 1.4
TMEM53-202ENST00000372237 AMOTL2Q9Y2J4 779 aa23.77■■□□□ 1.4
TMEM53-202ENST00000372237 ACEP12821 1306 aa23.76■■□□□ 1.39
TMEM53-202ENST00000372237 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
TMEM53-202ENST00000372237 EIF5BO60841 1220 aaKnown RBP23.75■■□□□ 1.39
TMEM53-202ENST00000372237 RAB3GAP1Q15042 981 aa23.75■■□□□ 1.39
TMEM53-202ENST00000372237 ANKRD44Q8N8A2 993 aa23.75■■□□□ 1.39
TMEM53-202ENST00000372237 GBP4Q96PP9 640 aa23.75■■□□□ 1.39
TMEM53-202ENST00000372237 RBM42Q9BTD8 480 aaKnown RBP23.75■■□□□ 1.39
TMEM53-202ENST00000372237 RPAP2Q8IXW5 612 aaPredicted RBP23.74■■□□□ 1.39
TMEM53-202ENST00000372237 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
TMEM53-202ENST00000372237 RGS12O14924 1447 aa23.74■■□□□ 1.39
TMEM53-202ENST00000372237 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
TMEM53-202ENST00000372237 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
TMEM53-202ENST00000372237 HSP90AB2PQ58FF8 381 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 FOXD4L1Q9NU39 408 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 TTC22Q5TAA0 569 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 ATP10DQ9P241 1426 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 PTPRCP08575 1304 aa23.73■■□□□ 1.39
TMEM53-202ENST00000372237 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.72■■□□□ 1.39
TMEM53-202ENST00000372237 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.72■■□□□ 1.39
TMEM53-202ENST00000372237 MSH6P52701 1360 aa23.72■■□□□ 1.39
TMEM53-202ENST00000372237 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
TMEM53-202ENST00000372237 CEP85Q6P2H3 762 aa23.71■■□□□ 1.39
TMEM53-202ENST00000372237 USP6P35125 1406 aa23.7■■□□□ 1.39
TMEM53-202ENST00000372237 PLEKHG3A1L390 1219 aa23.7■■□□□ 1.38
TMEM53-202ENST00000372237 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.38
TMEM53-202ENST00000372237 SOX12O15370 315 aa23.7■■□□□ 1.38
TMEM53-202ENST00000372237 PANK2Q9BZ23 570 aa23.7■■□□□ 1.38
TMEM53-202ENST00000372237 PEAK1Q9H792 1746 aa23.69■■□□□ 1.38
TMEM53-202ENST00000372237 MRE11P49959 708 aa23.69■■□□□ 1.38
TMEM53-202ENST00000372237 RTL1A6NKG5 1358 aa23.69■■□□□ 1.38
TMEM53-202ENST00000372237 NALCNQ8IZF0 1738 aa23.68■■□□□ 1.38
TMEM53-202ENST00000372237 CEP170BQ9Y4F5 1589 aaPredicted RBP23.68■■□□□ 1.38
TMEM53-202ENST00000372237 RGPD1P0DJD0 1748 aa23.68■■□□□ 1.38
TMEM53-202ENST00000372237 SLC4A2P04920 1241 aa23.67■■□□□ 1.38
TMEM53-202ENST00000372237 MEIS3Q99687 375 aa23.67■■□□□ 1.38
TMEM53-202ENST00000372237 GAS2L2Q8NHY3 880 aa23.67■■□□□ 1.38
TMEM53-202ENST00000372237 RIMS1Q86UR5 1692 aaKnown RBP23.66■■□□□ 1.38
TMEM53-202ENST00000372237 USP31Q70CQ4 1352 aa23.66■■□□□ 1.38
TMEM53-202ENST00000372237 APBB1O00213 710 aa23.66■■□□□ 1.38
TMEM53-202ENST00000372237 PTMSP20962 102 aa23.66■■□□□ 1.38
TMEM53-202ENST00000372237 RABEP1Q15276 862 aa23.66■■□□□ 1.38
TMEM53-202ENST00000372237 OTUD7AQ8TE49 926 aaPredicted RBP23.66■■□□□ 1.38
TMEM53-202ENST00000372237 ISY1Q9ULR0 285 aaKnown RBP23.66■■□□□ 1.38
TMEM53-202ENST00000372237 CRB1P82279 1406 aa23.65■■□□□ 1.38
TMEM53-202ENST00000372237 SKOR2Q2VWA4 1001 aaPredicted RBP23.65■■□□□ 1.38
TMEM53-202ENST00000372237 DIP2AQ14689 1571 aa23.65■■□□□ 1.38
TMEM53-202ENST00000372237 GRPEL1Q9HAV7 217 aa23.65■■□□□ 1.38
TMEM53-202ENST00000372237 RRAGDQ9NQL2 400 aaPredicted RBP23.65■■□□□ 1.38
TMEM53-202ENST00000372237 MIS18AQ9NYP9 233 aa23.65■■□□□ 1.38
TMEM53-202ENST00000372237 CASC1Q6TDU7 716 aa23.64■■□□□ 1.38
TMEM53-202ENST00000372237 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.38
TMEM53-202ENST00000372237 SMARCA5O60264 1052 aaPredicted RBP23.64■■□□□ 1.37
TMEM53-202ENST00000372237 USP26Q9BXU7 913 aa23.64■■□□□ 1.37
TMEM53-202ENST00000372237 ARHGEF10O15013 1369 aa23.63■■□□□ 1.37
TMEM53-202ENST00000372237 MAP3K19Q56UN5 1328 aa23.63■■□□□ 1.37
TMEM53-202ENST00000372237 SDSP20132 328 aa23.62■■□□□ 1.37
TMEM53-202ENST00000372237 FOXO3O43524 673 aa23.62■■□□□ 1.37
TMEM53-202ENST00000372237 TSPYL4Q9UJ04 414 aa23.62■■□□□ 1.37
TMEM53-202ENST00000372237 HMMRO75330 724 aa23.61■■□□□ 1.37
TMEM53-202ENST00000372237 MTHFSDQ2M296 383 aaKnown RBP23.61■■□□□ 1.37
TMEM53-202ENST00000372237 KCNA6P17658 529 aa23.61■■□□□ 1.37
TMEM53-202ENST00000372237 SSFA2P28290 1259 aa23.61■■□□□ 1.37
TMEM53-202ENST00000372237 SLC4A10Q6U841 1118 aa23.6■■□□□ 1.37
TMEM53-202ENST00000372237 ANKLE2Q86XL3 938 aa23.6■■□□□ 1.37
TMEM53-202ENST00000372237 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
TMEM53-202ENST00000372237 GOLGA6L22H0YM25 854 aa23.6■■□□□ 1.37
TMEM53-202ENST00000372237 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
TMEM53-202ENST00000372237 SSH2Q76I76 1423 aa23.59■■□□□ 1.37
TMEM53-202ENST00000372237 FMN2Q9NZ56 1722 aa23.59■■□□□ 1.37
TMEM53-202ENST00000372237 FLT4P35916 1363 aa23.58■■□□□ 1.37
TMEM53-202ENST00000372237 G2E3Q7L622 706 aa23.58■■□□□ 1.37
TMEM53-202ENST00000372237 F6X3S4 739 aa23.58■■□□□ 1.36
TMEM53-202ENST00000372237 CCT4P50991 539 aaKnown RBP23.58■■□□□ 1.36
TMEM53-202ENST00000372237 SBNO1A3KN83 1393 aa23.57■■□□□ 1.36
TMEM53-202ENST00000372237 CLEC17AQ6ZS10 378 aa23.56■■□□□ 1.36
TMEM53-202ENST00000372237 AK9Q5TCS8 1911 aa23.56■■□□□ 1.36
TMEM53-202ENST00000372237 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
TMEM53-202ENST00000372237 KDRP35968 1356 aa23.55■■□□□ 1.36
TMEM53-202ENST00000372237 REC8O95072 547 aa23.55■■□□□ 1.36
TMEM53-202ENST00000372237 AMPHP49418 695 aa23.55■■□□□ 1.36
TMEM53-202ENST00000372237 NGDNQ8NEJ9 315 aaKnown RBP23.54■■□□□ 1.36
TMEM53-202ENST00000372237 STK31Q9BXU1 1019 aa23.54■■□□□ 1.36
TMEM53-202ENST00000372237 ST18O60284 1047 aa23.54■■□□□ 1.36
TMEM53-202ENST00000372237 BAG4O95429 457 aaKnown RBP23.54■■□□□ 1.36
TMEM53-202ENST00000372237 GAS2L3Q86XJ1 694 aa23.54■■□□□ 1.36
TMEM53-202ENST00000372237 EYA1Q99502 592 aa23.54■■□□□ 1.36
TMEM53-202ENST00000372237 NUCB2P80303 420 aa23.53■■□□□ 1.36
TMEM53-202ENST00000372237 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
TMEM53-202ENST00000372237 OSBPL3Q9H4L5 887 aa23.52■■□□□ 1.36
TMEM53-202ENST00000372237 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
TMEM53-202ENST00000372237 ERC2O15083 957 aa23.51■■□□□ 1.35
TMEM53-202ENST00000372237 GNAI2P04899 355 aa23.51■■□□□ 1.35
TMEM53-202ENST00000372237 PDE1AP54750 535 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms