RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 KCNA6P17658 529 aa14.35□□□□□ -0.11
RAB39B-201ENST00000369454 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.34□□□□□ -0.11
RAB39B-201ENST00000369454 ABTB2Q8N961 1025 aa14.34□□□□□ -0.11
RAB39B-201ENST00000369454 MSH6P52701 1360 aa14.33□□□□□ -0.12
RAB39B-201ENST00000369454 CD2BP2O95400 341 aaKnown RBP14.33□□□□□ -0.12
RAB39B-201ENST00000369454 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
RAB39B-201ENST00000369454 GSPT1P15170 499 aaKnown RBP14.33□□□□□ -0.12
RAB39B-201ENST00000369454 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
RAB39B-201ENST00000369454 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
RAB39B-201ENST00000369454 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
RAB39B-201ENST00000369454 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
RAB39B-201ENST00000369454 TSHZ3Q63HK5 1081 aa14.32□□□□□ -0.12
RAB39B-201ENST00000369454 PLEKHM2Q8IWE5 1019 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 UBR1Q8IWV7 1749 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 CHMP5Q9NZZ3 219 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 C3P01024 1663 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 MON2Q7Z3U7 1717 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 CEP85Q6P2H3 762 aa14.31□□□□□ -0.12
RAB39B-201ENST00000369454 THEMISQ8N1K5 641 aaPredicted RBP14.31□□□□□ -0.12
RAB39B-201ENST00000369454 INTS3Q68E01 1043 aaKnown RBP14.3□□□□□ -0.12
RAB39B-201ENST00000369454 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
RAB39B-201ENST00000369454 FKBP5Q13451 457 aaPredicted RBP14.3□□□□□ -0.12
RAB39B-201ENST00000369454 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
RAB39B-201ENST00000369454 MCM4P33991 863 aa14.29□□□□□ -0.12
RAB39B-201ENST00000369454 XPCQ01831 940 aaPredicted RBP14.29□□□□□ -0.12
RAB39B-201ENST00000369454 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
RAB39B-201ENST00000369454 EXOC6BQ9Y2D4 811 aa14.29□□□□□ -0.12
RAB39B-201ENST00000369454 CDC45O75419 566 aa14.29□□□□□ -0.12
RAB39B-201ENST00000369454 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
RAB39B-201ENST00000369454 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
RAB39B-201ENST00000369454 STK31Q9BXU1 1019 aa14.29□□□□□ -0.12
RAB39B-201ENST00000369454 FLT4P35916 1363 aa14.28□□□□□ -0.12
RAB39B-201ENST00000369454 TBX22Q9Y458 520 aa14.28□□□□□ -0.12
RAB39B-201ENST00000369454 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
RAB39B-201ENST00000369454 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
RAB39B-201ENST00000369454 KIF2CQ99661 725 aa14.28□□□□□ -0.12
RAB39B-201ENST00000369454 AKAP12Q02952 1782 aa14.27□□□□□ -0.12
RAB39B-201ENST00000369454 PEAK1Q9H792 1746 aa14.27□□□□□ -0.12
RAB39B-201ENST00000369454 EIF2S2P20042 333 aaKnown RBP14.27□□□□□ -0.13
RAB39B-201ENST00000369454 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 HOXC9P31274 260 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 CRB1P82279 1406 aa14.26□□□□□ -0.13
RAB39B-201ENST00000369454 SETD1BQ9UPS6 1966 aaKnown RBP14.26□□□□□ -0.13
RAB39B-201ENST00000369454 SDSP20132 328 aa14.25□□□□□ -0.13
RAB39B-201ENST00000369454 RPAP2Q8IXW5 612 aaPredicted RBP14.25□□□□□ -0.13
RAB39B-201ENST00000369454 RGS12O14924 1447 aa14.25□□□□□ -0.13
RAB39B-201ENST00000369454 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
RAB39B-201ENST00000369454 USP31Q70CQ4 1352 aa14.25□□□□□ -0.13
RAB39B-201ENST00000369454 PTPRCP08575 1304 aa14.25□□□□□ -0.13
RAB39B-201ENST00000369454 CEP170BQ9Y4F5 1589 aaPredicted RBP14.25□□□□□ -0.13
RAB39B-201ENST00000369454 KNDC1Q76NI1 1749 aa14.24□□□□□ -0.13
RAB39B-201ENST00000369454 TRAK2O60296 914 aa14.24□□□□□ -0.13
RAB39B-201ENST00000369454 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
RAB39B-201ENST00000369454 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
RAB39B-201ENST00000369454 FLIIQ13045 1269 aa14.24□□□□□ -0.13
RAB39B-201ENST00000369454 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
RAB39B-201ENST00000369454 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
RAB39B-201ENST00000369454 ANXA1P04083 346 aa14.23□□□□□ -0.13
RAB39B-201ENST00000369454 TNPO1Q92973 898 aaKnown RBP14.23□□□□□ -0.13
RAB39B-201ENST00000369454 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
RAB39B-201ENST00000369454 ARHGEF10O15013 1369 aa14.23□□□□□ -0.13
RAB39B-201ENST00000369454 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
RAB39B-201ENST00000369454 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
RAB39B-201ENST00000369454 PHAXQ9H814 394 aaKnown RBP14.22□□□□□ -0.13
RAB39B-201ENST00000369454 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
RAB39B-201ENST00000369454 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
RAB39B-201ENST00000369454 K7ELQ4 463 aaPredicted RBP14.22□□□□□ -0.13
RAB39B-201ENST00000369454 HMMRO75330 724 aa14.22□□□□□ -0.13
RAB39B-201ENST00000369454 PSME1Q06323 249 aa14.22□□□□□ -0.13
RAB39B-201ENST00000369454 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.13
RAB39B-201ENST00000369454 GNAI2P04899 355 aa14.21□□□□□ -0.13
RAB39B-201ENST00000369454 CCDC30Q5VVM6 783 aa14.21□□□□□ -0.14
RAB39B-201ENST00000369454 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.14
RAB39B-201ENST00000369454 SNX21Q969T3 373 aa14.21□□□□□ -0.14
RAB39B-201ENST00000369454 RILPL2Q969X0 211 aa14.21□□□□□ -0.14
RAB39B-201ENST00000369454 LGR6Q9HBX8 967 aa14.21□□□□□ -0.14
RAB39B-201ENST00000369454 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.14
RAB39B-201ENST00000369454 TRIM6-TRIM34B2RNG4 842 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 CCT4P50991 539 aaKnown RBP14.2□□□□□ -0.14
RAB39B-201ENST00000369454 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 DIP2AQ14689 1571 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 SSFA2P28290 1259 aa14.2□□□□□ -0.14
RAB39B-201ENST00000369454 NBPF6Q5VWK0 638 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 NBPF4Q96M43 638 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 NRKQ7Z2Y5 1582 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 KCNQ3O43525 872 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
RAB39B-201ENST00000369454 CASC1Q6TDU7 716 aa14.19□□□□□ -0.14
RAB39B-201ENST00000369454 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
RAB39B-201ENST00000369454 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
RAB39B-201ENST00000369454 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
RAB39B-201ENST00000369454 MAP4K4O95819 1239 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms