RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 RGS12O14924 1447 aa22.84■■□□□ 1.25
LMNA-207ENST00000368301 DEKP35659 375 aaKnown RBP22.84■■□□□ 1.25
LMNA-207ENST00000368301 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
LMNA-207ENST00000368301 CHD1LQ86WJ1 897 aa22.84■■□□□ 1.25
LMNA-207ENST00000368301 TBC1D32Q96NH3 1257 aa22.84■■□□□ 1.25
LMNA-207ENST00000368301 KIAA0232Q92628 1395 aa22.83■■□□□ 1.25
LMNA-207ENST00000368301 NWD1Q149M9 1564 aa22.83■■□□□ 1.24
LMNA-207ENST00000368301 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.24
LMNA-207ENST00000368301 TSPYL4Q9UJ04 414 aa22.82■■□□□ 1.24
LMNA-207ENST00000368301 ANKRD45Q5TZF3 282 aa22.81■■□□□ 1.24
LMNA-207ENST00000368301 ADAMTSL3P82987 1691 aa22.81■■□□□ 1.24
LMNA-207ENST00000368301 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
LMNA-207ENST00000368301 USP54Q70EL1 1684 aa22.8■■□□□ 1.24
LMNA-207ENST00000368301 CHMP4BQ9H444 224 aaKnown RBP22.8■■□□□ 1.24
LMNA-207ENST00000368301 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
LMNA-207ENST00000368301 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
LMNA-207ENST00000368301 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
LMNA-207ENST00000368301 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
LMNA-207ENST00000368301 MFAP1P55081 439 aaKnown RBP22.78■■□□□ 1.24
LMNA-207ENST00000368301 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
LMNA-207ENST00000368301 G2E3Q7L622 706 aa22.77■■□□□ 1.24
LMNA-207ENST00000368301 GCC1Q96CN9 775 aa22.77■■□□□ 1.24
LMNA-207ENST00000368301 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
LMNA-207ENST00000368301 KIF24Q5T7B8 1368 aa22.76■■□□□ 1.23
LMNA-207ENST00000368301 MSH6P52701 1360 aa22.75■■□□□ 1.23
LMNA-207ENST00000368301 LTN1O94822 1766 aa22.75■■□□□ 1.23
LMNA-207ENST00000368301 NFKBIBQ15653 356 aa22.75■■□□□ 1.23
LMNA-207ENST00000368301 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
LMNA-207ENST00000368301 PLEKHG5O94827 1062 aa22.74■■□□□ 1.23
LMNA-207ENST00000368301 HAP1P54257 671 aaPredicted RBP22.74■■□□□ 1.23
LMNA-207ENST00000368301 ZBTB7CA1YPR0 619 aa22.74■■□□□ 1.23
LMNA-207ENST00000368301 GNAT3A8MTJ3 354 aa22.74■■□□□ 1.23
LMNA-207ENST00000368301 XPCQ01831 940 aaPredicted RBP22.74■■□□□ 1.23
LMNA-207ENST00000368301 PSME1Q06323 249 aa22.74■■□□□ 1.23
LMNA-207ENST00000368301 NPHP4O75161 1426 aaPredicted RBP22.74■■□□□ 1.23
LMNA-207ENST00000368301 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
LMNA-207ENST00000368301 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
LMNA-207ENST00000368301 LRRC37A3O60309 1634 aa22.73■■□□□ 1.23
LMNA-207ENST00000368301 NFAT5O94916 1531 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 PTPRCP08575 1304 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 MEIS3Q99687 375 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 F6X3S4 739 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
LMNA-207ENST00000368301 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
LMNA-207ENST00000368301 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
LMNA-207ENST00000368301 MAP3K5Q99683 1374 aa22.7■■□□□ 1.23
LMNA-207ENST00000368301 IP6K1Q92551 441 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 NECTIN2Q92692 538 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 HTATSF1O43719 755 aaKnown RBP22.7■■□□□ 1.22
LMNA-207ENST00000368301 BECN1Q14457 450 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 NBPF6Q5VWK0 638 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 NBPF4Q96M43 638 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 TBC1D2Q9BYX2 928 aa22.7■■□□□ 1.22
LMNA-207ENST00000368301 RTL1A6NKG5 1358 aa22.69■■□□□ 1.22
LMNA-207ENST00000368301 BMP2KLQ5H9B9 411 aa22.68■■□□□ 1.22
LMNA-207ENST00000368301 CEP85Q6P2H3 762 aa22.68■■□□□ 1.22
LMNA-207ENST00000368301 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
LMNA-207ENST00000368301 ANKRD44Q8N8A2 993 aa22.68■■□□□ 1.22
LMNA-207ENST00000368301 DCTPP1Q9H773 170 aa22.68■■□□□ 1.22
LMNA-207ENST00000368301 SLKQ9H2G2 1235 aaPredicted RBP22.67■■□□□ 1.22
LMNA-207ENST00000368301 LRRC59Q96AG4 307 aaKnown RBP22.66■■□□□ 1.22
LMNA-207ENST00000368301 C16orf71Q8IYS4 520 aaPredicted RBP22.66■■□□□ 1.22
LMNA-207ENST00000368301 RGPD2P0DJD1 1756 aa22.65■■□□□ 1.22
LMNA-207ENST00000368301 FRAT2O75474 233 aaPredicted RBP22.65■■□□□ 1.22
LMNA-207ENST00000368301 TAF7Q15545 349 aaPredicted RBP22.64■■□□□ 1.21
LMNA-207ENST00000368301 LMOD2Q6P5Q4 547 aa22.63■■□□□ 1.21
LMNA-207ENST00000368301 OTUD7AQ8TE49 926 aaPredicted RBP22.63■■□□□ 1.21
LMNA-207ENST00000368301 FAM208AQ9UK61 1670 aaKnown RBP22.62■■□□□ 1.21
LMNA-207ENST00000368301 APBB1O00213 710 aa22.62■■□□□ 1.21
LMNA-207ENST00000368301 GSPT1P15170 499 aaKnown RBP22.62■■□□□ 1.21
LMNA-207ENST00000368301 PLEKHM2Q8IWE5 1019 aa22.62■■□□□ 1.21
LMNA-207ENST00000368301 RPAP2Q8IXW5 612 aaPredicted RBP22.62■■□□□ 1.21
LMNA-207ENST00000368301 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
LMNA-207ENST00000368301 SMARCA5O60264 1052 aaPredicted RBP22.62■■□□□ 1.21
LMNA-207ENST00000368301 SPRYD3Q8NCJ5 442 aa22.62■■□□□ 1.21
LMNA-207ENST00000368301 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
LMNA-207ENST00000368301 FLIIQ13045 1269 aa22.61■■□□□ 1.21
LMNA-207ENST00000368301 KCNH5Q8NCM2 988 aa22.61■■□□□ 1.21
LMNA-207ENST00000368301 GCP02774 474 aa22.6■■□□□ 1.21
LMNA-207ENST00000368301 TBC1D9Q6ZT07 1266 aa22.6■■□□□ 1.21
LMNA-207ENST00000368301 ANTXR1Q9H6X2 564 aa22.6■■□□□ 1.21
LMNA-207ENST00000368301 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
LMNA-207ENST00000368301 PROSER2Q86WR7 435 aaPredicted RBP22.6■■□□□ 1.21
LMNA-207ENST00000368301 FKBP5Q13451 457 aaPredicted RBP22.59■■□□□ 1.21
LMNA-207ENST00000368301 CCT4P50991 539 aaKnown RBP22.58■■□□□ 1.21
LMNA-207ENST00000368301 ARHGEF25Q86VW2 580 aa22.58■■□□□ 1.21
LMNA-207ENST00000368301 CEMIPQ8WUJ3 1361 aa22.58■■□□□ 1.2
LMNA-207ENST00000368301 RBM25P49756 843 aaKnown RBP22.56■■□□□ 1.2
LMNA-207ENST00000368301 KCNQ3O43525 872 aa22.56■■□□□ 1.2
LMNA-207ENST00000368301 PHRF1Q9P1Y6 1649 aaKnown RBP22.55■■□□□ 1.2
LMNA-207ENST00000368301 KRT28Q7Z3Y7 464 aa22.55■■□□□ 1.2
LMNA-207ENST00000368301 AXIN2Q9Y2T1 843 aa22.55■■□□□ 1.2
LMNA-207ENST00000368301 SLIT3O75094 1523 aa22.55■■□□□ 1.2
LMNA-207ENST00000368301 PHAXQ9H814 394 aaKnown RBP22.54■■□□□ 1.2
LMNA-207ENST00000368301 TTC22Q5TAA0 569 aa22.54■■□□□ 1.2
LMNA-207ENST00000368301 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
LMNA-207ENST00000368301 ZNF530Q6P9A1 599 aaPredicted RBP22.54■■□□□ 1.2
LMNA-207ENST00000368301 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
LMNA-207ENST00000368301 BABAM1Q9NWV8 329 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms