RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 COG3Q96JB2 828 aa6.42□□□□□ -1.38
PDE4D-205ENST00000360047 IPO9Q96P70 1041 aaKnown RBP6.42□□□□□ -1.38
PDE4D-205ENST00000360047 A0A1W2PP64 1363 aa6.42□□□□□ -1.38
PDE4D-205ENST00000360047 BRD4O60885 1362 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-205ENST00000360047 GPATCH11Q8N954 259 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 SLC39A7Q92504 469 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 SBNO1A3KN83 1393 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 ARHGEF10O15013 1369 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 JCADQ9P266 1359 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 USP6P35125 1406 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 NME9Q86XW9 330 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 CABLES1Q8TDN4 633 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 GGNBP2Q9H3C7 697 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 RGPD8O14715 1765 aaPredicted RBP6.41□□□□□ -1.38
PDE4D-205ENST00000360047 KIF1AQ12756 1690 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 LRP5O75197 1615 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 USP32Q8NFA0 1604 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 RRP9O43818 475 aaKnown RBP6.41□□□□□ -1.38
PDE4D-205ENST00000360047 C7P10643 843 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 CARD14Q9BXL6 1004 aa6.41□□□□□ -1.38
PDE4D-205ENST00000360047 CPSF1Q10570 1443 aaKnown RBP6.4□□□□□ -1.38
PDE4D-205ENST00000360047 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.38
PDE4D-205ENST00000360047 ITSN1Q15811 1721 aa6.4□□□□□ -1.38
PDE4D-205ENST00000360047 APBB1O00213 710 aa6.4□□□□□ -1.38
PDE4D-205ENST00000360047 ADAMTS2O95450 1211 aa6.4□□□□□ -1.38
PDE4D-205ENST00000360047 EDC4Q6P2E9 1401 aaKnown RBP6.4□□□□□ -1.39
PDE4D-205ENST00000360047 CCER2I3L3R5 266 aa6.4□□□□□ -1.39
PDE4D-205ENST00000360047 CANXP27824 592 aaKnown RBP6.4□□□□□ -1.39
PDE4D-205ENST00000360047 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.39
PDE4D-205ENST00000360047 CC2D1BQ5T0F9 858 aaKnown RBP6.4□□□□□ -1.39
PDE4D-205ENST00000360047 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.39
PDE4D-205ENST00000360047 MAMSTRQ6ZN01 415 aa6.4□□□□□ -1.39
PDE4D-205ENST00000360047 MORC1Q86VD1 984 aa6.4□□□□□ -1.39
PDE4D-205ENST00000360047 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.39
PDE4D-205ENST00000360047 TNS3Q68CZ2 1445 aa6.4□□□□□ -1.39
PDE4D-205ENST00000360047 FYB1O15117 783 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 ASTLQ6HA08 431 aaPredicted RBP6.39□□□□□ -1.39
PDE4D-205ENST00000360047 KCNH5Q8NCM2 988 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 PHLPP1O60346 1717 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 ANP32AP39687 249 aaKnown RBP6.39□□□□□ -1.39
PDE4D-205ENST00000360047 TNNT2P45379 298 aaPredicted RBP6.39□□□□□ -1.39
PDE4D-205ENST00000360047 ZC3H6P61129 1189 aaKnown RBP6.39□□□□□ -1.39
PDE4D-205ENST00000360047 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 SPATA31A6Q5VVP1 1343 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 AHDC1Q5TGY3 1603 aaPredicted RBP6.39□□□□□ -1.39
PDE4D-205ENST00000360047 GCP02774 474 aa6.39□□□□□ -1.39
PDE4D-205ENST00000360047 PXDNQ92626 1479 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 PNPLA6Q8IY17 1366 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 MS4A3Q96HJ5 214 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 NGLY1Q96IV0 654 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 DNAJC2Q99543 621 aaKnown RBP6.38□□□□□ -1.39
PDE4D-205ENST00000360047 TSPYL2Q9H2G4 693 aaPredicted RBP6.38□□□□□ -1.39
PDE4D-205ENST00000360047 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 PCDH10Q9P2E7 1040 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 CD163L1Q9NR16 1453 aa6.38□□□□□ -1.39
PDE4D-205ENST00000360047 MCCP23508 829 aa6.37□□□□□ -1.39
PDE4D-205ENST00000360047 AMPHP49418 695 aa6.37□□□□□ -1.39
PDE4D-205ENST00000360047 C8orf37Q96NL8 207 aa6.37□□□□□ -1.39
PDE4D-205ENST00000360047 TOPAZ1Q8N9V7 1692 aa6.37□□□□□ -1.39
PDE4D-205ENST00000360047 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
PDE4D-205ENST00000360047 MFAP1P55081 439 aaKnown RBP6.37□□□□□ -1.39
PDE4D-205ENST00000360047 BRD1O95696 1058 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 EVA1CP58658 441 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 NHSL1Q5SYE7 1610 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 SSH2Q76I76 1423 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 ATMINO43313 823 aaPredicted RBP6.36□□□□□ -1.39
PDE4D-205ENST00000360047 NEFMP07197 916 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 TMTC2Q8N394 836 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 SGIP1Q9BQI5 828 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 PTMAP06454 111 aaKnown RBP6.36□□□□□ -1.39
PDE4D-205ENST00000360047 CHRNA2Q15822 529 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 LAS1LQ9Y4W2 734 aaKnown RBP6.36□□□□□ -1.39
PDE4D-205ENST00000360047 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
PDE4D-205ENST00000360047 ANP32CO43423 234 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 FBLN1P23142 703 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 RRS1Q15050 365 aaKnown RBP6.35□□□□□ -1.39
PDE4D-205ENST00000360047 NSD2O96028 1365 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 MED1Q15648 1581 aaPredicted RBP6.35□□□□□ -1.39
PDE4D-205ENST00000360047 COL16A1Q07092 1604 aaPredicted RBP6.35□□□□□ -1.39
PDE4D-205ENST00000360047 MAFGO15525 162 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 HSP90AA2PQ14568 343 aaPredicted RBP6.35□□□□□ -1.39
PDE4D-205ENST00000360047 KIF12Q96FN5 646 aa6.35□□□□□ -1.39
PDE4D-205ENST00000360047 USP19O94966 1318 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 FAM83GA6ND36 823 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 SETQ01105 290 aaPredicted RBP6.34□□□□□ -1.39
PDE4D-205ENST00000360047 GSE1Q14687 1217 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 NEUROD2Q15784 382 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 STRN4Q9NRL3 753 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 METRNQ9UJH8 293 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 KIAA0232Q92628 1395 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 TIE1P35590 1138 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 LTV1Q96GA3 475 aaPredicted RBP6.34□□□□□ -1.39
PDE4D-205ENST00000360047 BTG4Q9NY30 223 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 AKAP12Q02952 1782 aa6.34□□□□□ -1.39
PDE4D-205ENST00000360047 LOC102724159A0A0B4J2E5 919 aa6.34□□□□□ -1.4
PDE4D-205ENST00000360047 PWP2Q15269 919 aaKnown RBP6.34□□□□□ -1.4
PDE4D-205ENST00000360047 RALBP1Q15311 655 aa6.34□□□□□ -1.4
PDE4D-205ENST00000360047 ARHGEF25Q86VW2 580 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms