RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 ANAPC15P60006 121 aa13.43□□□□□ -0.26
TMC3-201ENST00000359440 SETQ01105 290 aaPredicted RBP13.43□□□□□ -0.26
TMC3-201ENST00000359440 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
TMC3-201ENST00000359440 CAVIN2O95810 425 aa13.43□□□□□ -0.26
TMC3-201ENST00000359440 HSP90B2PQ58FF3 399 aa13.42□□□□□ -0.26
TMC3-201ENST00000359440 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
TMC3-201ENST00000359440 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
TMC3-201ENST00000359440 LRSAM1Q6UWE0 723 aa13.42□□□□□ -0.26
TMC3-201ENST00000359440 ERCC4Q92889 916 aaPredicted RBP13.42□□□□□ -0.26
TMC3-201ENST00000359440 SPATA32Q96LK8 384 aa13.42□□□□□ -0.26
TMC3-201ENST00000359440 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
TMC3-201ENST00000359440 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
TMC3-201ENST00000359440 NEMFO60524 1076 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
TMC3-201ENST00000359440 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 LIMCH1Q9UPQ0 1083 aa13.41□□□□□ -0.26
TMC3-201ENST00000359440 A2MP01023 1474 aa13.4□□□□□ -0.26
TMC3-201ENST00000359440 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
TMC3-201ENST00000359440 PSME1Q06323 249 aa13.4□□□□□ -0.26
TMC3-201ENST00000359440 ZSCAN23Q3MJ62 389 aa13.4□□□□□ -0.26
TMC3-201ENST00000359440 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
TMC3-201ENST00000359440 ABCA5Q8WWZ7 1642 aa13.4□□□□□ -0.26
TMC3-201ENST00000359440 CBFA2T2O43439 604 aa13.4□□□□□ -0.27
TMC3-201ENST00000359440 STK38Q15208 465 aa13.4□□□□□ -0.27
TMC3-201ENST00000359440 ZBTB40Q9NUA8 1239 aa13.39□□□□□ -0.27
TMC3-201ENST00000359440 ERICH2A1L162 156 aa13.39□□□□□ -0.27
TMC3-201ENST00000359440 CTAGE5O15320 804 aa13.39□□□□□ -0.27
TMC3-201ENST00000359440 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
TMC3-201ENST00000359440 EXOC6BQ9Y2D4 811 aa13.39□□□□□ -0.27
TMC3-201ENST00000359440 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
TMC3-201ENST00000359440 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
TMC3-201ENST00000359440 SMC2O95347 1197 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 ANKRD44Q8N8A2 993 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 XBP1P17861 261 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 UBE2HP62256 183 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 NFXL1Q6ZNB6 911 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
TMC3-201ENST00000359440 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
TMC3-201ENST00000359440 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 APPP05067 770 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 TERF1P54274 439 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
TMC3-201ENST00000359440 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 FANCAO15360 1455 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 KDM5CP41229 1560 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
TMC3-201ENST00000359440 OFD1O75665 1012 aa13.37□□□□□ -0.27
TMC3-201ENST00000359440 GNAT3A8MTJ3 354 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
TMC3-201ENST00000359440 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 RLBP1P12271 317 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 FILIP1LQ4L180 1135 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
TMC3-201ENST00000359440 AK7Q96M32 723 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
TMC3-201ENST00000359440 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
TMC3-201ENST00000359440 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
TMC3-201ENST00000359440 ME1P48163 572 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
TMC3-201ENST00000359440 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
TMC3-201ENST00000359440 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
TMC3-201ENST00000359440 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
TMC3-201ENST00000359440 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 DISP1Q96F81 1524 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 AACSQ86V21 672 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
TMC3-201ENST00000359440 CGNQ9P2M7 1197 aaKnown RBP13.35□□□□□ -0.27
TMC3-201ENST00000359440 SEC24BO95487 1268 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 ANO10Q9NW15 660 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 STX6O43752 255 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
TMC3-201ENST00000359440 TMX3Q96JJ7 454 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
TMC3-201ENST00000359440 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
TMC3-201ENST00000359440 SDSP20132 328 aa13.33□□□□□ -0.27
TMC3-201ENST00000359440 USP25Q9UHP3 1055 aa13.33□□□□□ -0.27
TMC3-201ENST00000359440 MAGI3Q5TCQ9 1506 aa13.33□□□□□ -0.27
TMC3-201ENST00000359440 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
TMC3-201ENST00000359440 CDKL5O76039 1030 aa13.33□□□□□ -0.28
TMC3-201ENST00000359440 FAM69CQ0P6D2 419 aa13.33□□□□□ -0.28
TMC3-201ENST00000359440 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
TMC3-201ENST00000359440 WASLO00401 505 aaPredicted RBP13.33□□□□□ -0.28
TMC3-201ENST00000359440 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
TMC3-201ENST00000359440 PTPN14Q15678 1187 aa13.33□□□□□ -0.28
TMC3-201ENST00000359440 KIF18AQ8NI77 898 aa13.33□□□□□ -0.28
TMC3-201ENST00000359440 CD109Q6YHK3 1445 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms