RNA–Protein interactions for RNA: ENST00000359001.9

KCNIP4-201, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 1 (best) BASIC

Gene KCNIP4, Length 2,168 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-201ENST00000359001 FRAT2O75474 233 aaPredicted RBP8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 HSP90AB2PQ58FF8 381 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 EID1Q9Y6B2 187 aa8.89□□□□□ -0.99
KCNIP4-201ENST00000359001 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 C22orf23Q9BZE7 217 aa8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 BMP2KLQ5H9B9 411 aa8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 INTS3Q68E01 1043 aaKnown RBP8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 C1orf115Q9H7X2 142 aa8.88□□□□□ -0.99
KCNIP4-201ENST00000359001 N4BP2Q86UW6 1770 aaPredicted RBP8.87□□□□□ -0.99
KCNIP4-201ENST00000359001 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
KCNIP4-201ENST00000359001 GSE1Q14687 1217 aa8.87□□□□□ -0.99
KCNIP4-201ENST00000359001 IGSF1Q8N6C5 1336 aa8.87□□□□□ -0.99
KCNIP4-201ENST00000359001 NCOA3Q9Y6Q9 1424 aa8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 MFAP1P55081 439 aaKnown RBP8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 ZNF142P52746 1687 aaPredicted RBP8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 CHD2O14647 1828 aaKnown RBP8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 KRT24Q2M2I5 525 aa8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 MCM10Q7L590 875 aa8.86□□□□□ -0.99
KCNIP4-201ENST00000359001 HAP1P54257 671 aaPredicted RBP8.85□□□□□ -0.99
KCNIP4-201ENST00000359001 ANKRD45Q5TZF3 282 aa8.85□□□□□ -0.99
KCNIP4-201ENST00000359001 THEMISQ8N1K5 641 aaPredicted RBP8.85□□□□□ -0.99
KCNIP4-201ENST00000359001 SLKQ9H2G2 1235 aaPredicted RBP8.85□□□□□ -0.99
KCNIP4-201ENST00000359001 PTPRCP08575 1304 aa8.84□□□□□ -0.99
KCNIP4-201ENST00000359001 MSH6P52701 1360 aa8.84□□□□□ -0.99
KCNIP4-201ENST00000359001 MTHFSDQ2M296 383 aaKnown RBP8.84□□□□□ -0.99
KCNIP4-201ENST00000359001 DCTPP1Q9H773 170 aa8.84□□□□□ -0.99
KCNIP4-201ENST00000359001 LTN1O94822 1766 aa8.84□□□□□ -0.99
KCNIP4-201ENST00000359001 PHRF1Q9P1Y6 1649 aaKnown RBP8.84□□□□□ -1
KCNIP4-201ENST00000359001 EYA1Q99502 592 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 RTL1A6NKG5 1358 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 FOXO3O43524 673 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 ANKRD44Q8N8A2 993 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 SNX21Q969T3 373 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 TUBGCP6Q96RT7 1819 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 CACNA1FO60840 1977 aa8.83□□□□□ -1
KCNIP4-201ENST00000359001 KCNA6P17658 529 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 DDIT3P35638 169 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
KCNIP4-201ENST00000359001 KIF2CQ99661 725 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 NFAT5O94916 1531 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
KCNIP4-201ENST00000359001 SOX12O15370 315 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 CEP85Q6P2H3 762 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
KCNIP4-201ENST00000359001 RPAP2Q8IXW5 612 aaPredicted RBP8.82□□□□□ -1
KCNIP4-201ENST00000359001 HTATSF1O43719 755 aaKnown RBP8.81□□□□□ -1
KCNIP4-201ENST00000359001 GSPT1P15170 499 aaKnown RBP8.81□□□□□ -1
KCNIP4-201ENST00000359001 PLEKHM2Q8IWE5 1019 aa8.81□□□□□ -1
KCNIP4-201ENST00000359001 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
KCNIP4-201ENST00000359001 HOXC9P31274 260 aa8.8□□□□□ -1
KCNIP4-201ENST00000359001 AMPHP49418 695 aa8.8□□□□□ -1
KCNIP4-201ENST00000359001 MEIS3Q99687 375 aa8.8□□□□□ -1
KCNIP4-201ENST00000359001 KDM3BQ7LBC6 1761 aa8.8□□□□□ -1
KCNIP4-201ENST00000359001 TTC22Q5TAA0 569 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 HSCBQ8IWL3 235 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 MIS18AQ9NYP9 233 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 CHMP5Q9NZZ3 219 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 TSPYL4Q9UJ04 414 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 PXDNLA1KZ92 1463 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 MAP3K5Q99683 1374 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 CDC45O75419 566 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 SLC4A2P04920 1241 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 NLRP6P59044 892 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 G2E3Q7L622 706 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 RTF1Q92541 710 aaKnown RBP8.79□□□□□ -1
KCNIP4-201ENST00000359001 LMO7Q8WWI1 1683 aa8.79□□□□□ -1
KCNIP4-201ENST00000359001 SOS1Q07889 1333 aaPredicted RBP8.78□□□□□ -1
KCNIP4-201ENST00000359001 ADAMTSL3P82987 1691 aa8.78□□□□□ -1
KCNIP4-201ENST00000359001 ADGRL3Q9HAR2 1447 aa8.78□□□□□ -1
KCNIP4-201ENST00000359001 CAMTA1Q9Y6Y1 1673 aa8.78□□□□□ -1
KCNIP4-201ENST00000359001 MAPK8IP2Q13387 824 aaPredicted RBP8.78□□□□□ -1
KCNIP4-201ENST00000359001 BABAM1Q9NWV8 329 aa8.78□□□□□ -1
KCNIP4-201ENST00000359001 RGPD2P0DJD1 1756 aa8.78□□□□□ -1
KCNIP4-201ENST00000359001 GNAT3A8MTJ3 354 aa8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 MCM4P33991 863 aa8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 CCT4P50991 539 aaKnown RBP8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 NCAPD2Q15021 1401 aa8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 C16orf71Q8IYS4 520 aaPredicted RBP8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 OTUD7AQ8TE49 926 aaPredicted RBP8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 CEMIPQ8WUJ3 1361 aa8.77□□□□□ -1.01
KCNIP4-201ENST00000359001 CD2BP2O95400 341 aaKnown RBP8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 IL17REQ8NFR9 667 aa8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 SLIT3O75094 1523 aa8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 F6X3S4 739 aa8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 CIZ1Q9ULV3 898 aaPredicted RBP8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 PHF8Q9UPP1 1060 aa8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 TRPM3Q9HCF6 1732 aaPredicted RBP8.76□□□□□ -1.01
KCNIP4-201ENST00000359001 SALL3Q9BXA9 1300 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 EIF5BO60841 1220 aaKnown RBP8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 ABTB2Q8N961 1025 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 OSBPL3Q9H4L5 887 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 FLIIQ13045 1269 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
KCNIP4-201ENST00000359001 SMARCA5O60264 1052 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms