RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CEP85Q6P2H3 762 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 EYA1Q99502 592 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 DCTPP1Q9H773 170 aa10.22□□□□□ -0.77
CD46-205ENST00000358170 MAP4K4O95819 1239 aaPredicted RBP10.21□□□□□ -0.77
CD46-205ENST00000358170 XPCQ01831 940 aaPredicted RBP10.21□□□□□ -0.77
CD46-205ENST00000358170 TNRQ92752 1358 aa10.21□□□□□ -0.77
CD46-205ENST00000358170 GBP4Q96PP9 640 aa10.21□□□□□ -0.77
CD46-205ENST00000358170 KIF2CQ99661 725 aa10.21□□□□□ -0.77
CD46-205ENST00000358170 MSH6P52701 1360 aa10.21□□□□□ -0.78
CD46-205ENST00000358170 ANXA1P04083 346 aa10.21□□□□□ -0.78
CD46-205ENST00000358170 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.78
CD46-205ENST00000358170 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 CASC1Q6TDU7 716 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 ANKRD44Q8N8A2 993 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 USP32Q8NFA0 1604 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
CD46-205ENST00000358170 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
CD46-205ENST00000358170 RICTORQ6R327 1708 aa10.19□□□□□ -0.78
CD46-205ENST00000358170 CPSF1Q10570 1443 aaKnown RBP10.19□□□□□ -0.78
CD46-205ENST00000358170 DTNBO60941 627 aa10.19□□□□□ -0.78
CD46-205ENST00000358170 PKP1Q13835 747 aa10.19□□□□□ -0.78
CD46-205ENST00000358170 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
CD46-205ENST00000358170 PPP6R1Q9UPN7 881 aa10.19□□□□□ -0.78
CD46-205ENST00000358170 ATP7BP35670 1465 aa10.19□□□□□ -0.78
CD46-205ENST00000358170 HMMRO75330 724 aa10.18□□□□□ -0.78
CD46-205ENST00000358170 RPAP2Q8IXW5 612 aaPredicted RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 BRPF1P55201 1214 aaPredicted RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 ZGPATQ8N5A5 531 aaKnown RBP10.18□□□□□ -0.78
CD46-205ENST00000358170 MED14O60244 1454 aa10.18□□□□□ -0.78
CD46-205ENST00000358170 GOLGA6L22H0YM25 854 aa10.18□□□□□ -0.78
CD46-205ENST00000358170 ANO2Q9NQ90 1003 aa10.18□□□□□ -0.78
CD46-205ENST00000358170 TMEM2Q9UHN6 1383 aa10.18□□□□□ -0.78
CD46-205ENST00000358170 NEK4P51957 841 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 SNX21Q969T3 373 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
CD46-205ENST00000358170 LRRFIP2Q9Y608 721 aaKnown RBP10.17□□□□□ -0.78
CD46-205ENST00000358170 PNMA6EA0A0J9YXQ4 647 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 GNAI2P04899 355 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 KCNA6P17658 529 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 FLIIQ13045 1269 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 GAS2L3Q86XJ1 694 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 GRPEL1Q9HAV7 217 aa10.17□□□□□ -0.78
CD46-205ENST00000358170 AATKQ6ZMQ8 1374 aa10.16□□□□□ -0.78
CD46-205ENST00000358170 NAP1L5Q96NT1 182 aaPredicted RBP10.16□□□□□ -0.78
CD46-205ENST00000358170 USP26Q9BXU7 913 aa10.16□□□□□ -0.78
CD46-205ENST00000358170 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
CD46-205ENST00000358170 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
CD46-205ENST00000358170 RTL1A6NKG5 1358 aa10.16□□□□□ -0.78
CD46-205ENST00000358170 TRIM44Q96DX7 344 aaPredicted RBP10.16□□□□□ -0.78
CD46-205ENST00000358170 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
CD46-205ENST00000358170 HDGFL1Q5TGJ6 251 aa10.15□□□□□ -0.78
CD46-205ENST00000358170 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.78
CD46-205ENST00000358170 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
CD46-205ENST00000358170 GNAT3A8MTJ3 354 aa10.15□□□□□ -0.78
CD46-205ENST00000358170 OS9Q13438 667 aaPredicted RBP10.15□□□□□ -0.78
CD46-205ENST00000358170 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
CD46-205ENST00000358170 PRPF40AO75400 957 aaKnown RBP10.15□□□□□ -0.79
CD46-205ENST00000358170 SURF6O75683 361 aaKnown RBP10.15□□□□□ -0.79
CD46-205ENST00000358170 PDE1AP54750 535 aa10.15□□□□□ -0.79
CD46-205ENST00000358170 RABEP1Q15276 862 aa10.15□□□□□ -0.79
CD46-205ENST00000358170 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.79
CD46-205ENST00000358170 PIK3R4Q99570 1358 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 ST18O60284 1047 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 CCDC30Q5VVM6 783 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 IL17REQ8NFR9 667 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 ESCO1Q5FWF5 840 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
CD46-205ENST00000358170 ERC2O15083 957 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 REC8O95072 547 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
CD46-205ENST00000358170 UBTFL1P0CB47 393 aaPredicted RBP10.14□□□□□ -0.79
CD46-205ENST00000358170 MRE11P49959 708 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
CD46-205ENST00000358170 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 SETD1BQ9UPS6 1966 aaKnown RBP10.14□□□□□ -0.79
CD46-205ENST00000358170 PTPRCP08575 1304 aa10.14□□□□□ -0.79
CD46-205ENST00000358170 KCNQ3O43525 872 aa10.13□□□□□ -0.79
CD46-205ENST00000358170 PSME1Q06323 249 aa10.13□□□□□ -0.79
CD46-205ENST00000358170 MPRIPQ6WCQ1 1025 aa10.13□□□□□ -0.79
CD46-205ENST00000358170 LGR6Q9HBX8 967 aa10.13□□□□□ -0.79
CD46-205ENST00000358170 DDX54Q8TDD1 881 aaKnown RBP10.13□□□□□ -0.79
CD46-205ENST00000358170 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
CD46-205ENST00000358170 MX1P20591 662 aa10.12□□□□□ -0.79
CD46-205ENST00000358170 HOXC9P31274 260 aa10.12□□□□□ -0.79
CD46-205ENST00000358170 AIMP1Q12904 312 aaKnown RBP10.12□□□□□ -0.79
CD46-205ENST00000358170 UNC5CLQ8IV45 518 aa10.12□□□□□ -0.79
CD46-205ENST00000358170 USP6P35125 1406 aa10.12□□□□□ -0.79
CD46-205ENST00000358170 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
CD46-205ENST00000358170 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
CD46-205ENST00000358170 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
CD46-205ENST00000358170 TEFQ10587 303 aa10.11□□□□□ -0.79
CD46-205ENST00000358170 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms