RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
COL13A1-202ENST00000357811 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
COL13A1-202ENST00000357811 TTC22Q5TAA0 569 aa25.34■■□□□ 1.65
COL13A1-202ENST00000357811 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
COL13A1-202ENST00000357811 TSPYL4Q9UJ04 414 aa25.34■■□□□ 1.65
COL13A1-202ENST00000357811 HDGFP51858 240 aaKnown RBP25.33■■□□□ 1.65
COL13A1-202ENST00000357811 MTHFSDQ2M296 383 aaKnown RBP25.33■■□□□ 1.65
COL13A1-202ENST00000357811 SETD1AO15047 1707 aaKnown RBP25.33■■□□□ 1.65
COL13A1-202ENST00000357811 MAP3K19Q56UN5 1328 aa25.33■■□□□ 1.65
COL13A1-202ENST00000357811 PLEKHG5O94827 1062 aa25.33■■□□□ 1.65
COL13A1-202ENST00000357811 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
COL13A1-202ENST00000357811 FSD2A1L4K1 749 aa25.32■■□□□ 1.64
COL13A1-202ENST00000357811 LTV1Q96GA3 475 aaPredicted RBP25.32■■□□□ 1.64
COL13A1-202ENST00000357811 SDSP20132 328 aa25.32■■□□□ 1.64
COL13A1-202ENST00000357811 RTF1Q92541 710 aaKnown RBP25.32■■□□□ 1.64
COL13A1-202ENST00000357811 DIP2BQ9P265 1576 aa25.31■■□□□ 1.64
COL13A1-202ENST00000357811 NGDNQ8NEJ9 315 aaKnown RBP25.31■■□□□ 1.64
COL13A1-202ENST00000357811 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
COL13A1-202ENST00000357811 TNRQ92752 1358 aa25.3■■□□□ 1.64
COL13A1-202ENST00000357811 EXOC6BQ9Y2D4 811 aa25.3■■□□□ 1.64
COL13A1-202ENST00000357811 KNDC1Q76NI1 1749 aa25.3■■□□□ 1.64
COL13A1-202ENST00000357811 NCOA3Q9Y6Q9 1424 aa25.3■■□□□ 1.64
COL13A1-202ENST00000357811 AMPHP49418 695 aa25.29■■□□□ 1.64
COL13A1-202ENST00000357811 GAS2L3Q86XJ1 694 aa25.29■■□□□ 1.64
COL13A1-202ENST00000357811 GBP4Q96PP9 640 aa25.29■■□□□ 1.64
COL13A1-202ENST00000357811 RTL1A6NKG5 1358 aa25.28■■□□□ 1.64
COL13A1-202ENST00000357811 TMEM2Q9UHN6 1383 aa25.27■■□□□ 1.64
COL13A1-202ENST00000357811 PKP1Q13835 747 aa25.27■■□□□ 1.64
COL13A1-202ENST00000357811 RGS12O14924 1447 aa25.27■■□□□ 1.64
COL13A1-202ENST00000357811 ATP10DQ9P241 1426 aa25.27■■□□□ 1.64
COL13A1-202ENST00000357811 GRPEL1Q9HAV7 217 aa25.27■■□□□ 1.64
COL13A1-202ENST00000357811 AK9Q5TCS8 1911 aa25.26■■□□□ 1.63
COL13A1-202ENST00000357811 FOXD4L5Q5VV16 416 aaPredicted RBP25.26■■□□□ 1.63
COL13A1-202ENST00000357811 FOXD4L4Q8WXT5 416 aaPredicted RBP25.26■■□□□ 1.63
COL13A1-202ENST00000357811 RPAP2Q8IXW5 612 aaPredicted RBP25.26■■□□□ 1.63
COL13A1-202ENST00000357811 CHAMP1Q96JM3 812 aa25.26■■□□□ 1.63
COL13A1-202ENST00000357811 C14orf37Q86TY3 774 aa25.25■■□□□ 1.63
COL13A1-202ENST00000357811 USP26Q9BXU7 913 aa25.25■■□□□ 1.63
COL13A1-202ENST00000357811 AMOTL2Q9Y2J4 779 aa25.25■■□□□ 1.63
COL13A1-202ENST00000357811 AGLP35573 1532 aa25.25■■□□□ 1.63
COL13A1-202ENST00000357811 EYA1Q99502 592 aa25.24■■□□□ 1.63
COL13A1-202ENST00000357811 NCLP19338 710 aaKnown RBP25.23■■□□□ 1.63
COL13A1-202ENST00000357811 NOL8Q76FK4 1167 aaKnown RBP25.23■■□□□ 1.63
COL13A1-202ENST00000357811 FKBP5Q13451 457 aaPredicted RBP25.22■■□□□ 1.63
COL13A1-202ENST00000357811 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
COL13A1-202ENST00000357811 CIZ1Q9ULV3 898 aaPredicted RBP25.22■■□□□ 1.63
COL13A1-202ENST00000357811 MRE11P49959 708 aa25.22■■□□□ 1.63
COL13A1-202ENST00000357811 ZGPATQ8N5A5 531 aaKnown RBP25.22■■□□□ 1.63
COL13A1-202ENST00000357811 NLRP6P59044 892 aa25.21■■□□□ 1.63
COL13A1-202ENST00000357811 USHBP1Q8N6Y0 703 aa25.21■■□□□ 1.63
COL13A1-202ENST00000357811 USP6P35125 1406 aa25.21■■□□□ 1.63
COL13A1-202ENST00000357811 ZBTB7CA1YPR0 619 aa25.21■■□□□ 1.63
COL13A1-202ENST00000357811 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.63
COL13A1-202ENST00000357811 PLEKHG3A1L390 1219 aa25.2■■□□□ 1.63
COL13A1-202ENST00000357811 MCTP1Q6DN14 999 aa25.2■■□□□ 1.63
COL13A1-202ENST00000357811 C3P01024 1663 aa25.2■■□□□ 1.62
COL13A1-202ENST00000357811 MON2Q7Z3U7 1717 aa25.2■■□□□ 1.62
COL13A1-202ENST00000357811 PTPRCP08575 1304 aa25.19■■□□□ 1.62
COL13A1-202ENST00000357811 HAP1P54257 671 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-202ENST00000357811 SIRT1Q96EB6 747 aa25.19■■□□□ 1.62
COL13A1-202ENST00000357811 DDX49Q9Y6V7 483 aaKnown RBP25.19■■□□□ 1.62
COL13A1-202ENST00000357811 OVOS2A0A0J9YW53 1432 aa25.19■■□□□ 1.62
COL13A1-202ENST00000357811 OVOS2Q6IE36 1432 aa25.19■■□□□ 1.62
COL13A1-202ENST00000357811 RABEP1Q15276 862 aa25.19■■□□□ 1.62
COL13A1-202ENST00000357811 CRB1P82279 1406 aa25.18■■□□□ 1.62
COL13A1-202ENST00000357811 RIMS1Q86UR5 1692 aaKnown RBP25.18■■□□□ 1.62
COL13A1-202ENST00000357811 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
COL13A1-202ENST00000357811 BAG4O95429 457 aaKnown RBP25.17■■□□□ 1.62
COL13A1-202ENST00000357811 CASC1Q6TDU7 716 aa25.17■■□□□ 1.62
COL13A1-202ENST00000357811 TECPR2O15040 1411 aa25.17■■□□□ 1.62
COL13A1-202ENST00000357811 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
COL13A1-202ENST00000357811 PNMA6EA0A0J9YXQ4 647 aa25.17■■□□□ 1.62
COL13A1-202ENST00000357811 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-202ENST00000357811 RILPL2Q969X0 211 aa25.16■■□□□ 1.62
COL13A1-202ENST00000357811 HMMRO75330 724 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 PDE1AP54750 535 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 KIAA0232Q92628 1395 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 PEAK1Q9H792 1746 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 PTPRUQ92729 1446 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 EID1Q9Y6B2 187 aa25.15■■□□□ 1.62
COL13A1-202ENST00000357811 TRIM6-TRIM34B2RNG4 842 aa25.14■■□□□ 1.62
COL13A1-202ENST00000357811 FLIIQ13045 1269 aa25.14■■□□□ 1.62
COL13A1-202ENST00000357811 GOLGA6L22H0YM25 854 aa25.14■■□□□ 1.61
COL13A1-202ENST00000357811 KIF24Q5T7B8 1368 aa25.13■■□□□ 1.61
COL13A1-202ENST00000357811 GNAI2P04899 355 aa25.13■■□□□ 1.61
COL13A1-202ENST00000357811 IL1RAPL2Q9NP60 686 aa25.13■■□□□ 1.61
COL13A1-202ENST00000357811 AKAP12Q02952 1782 aa25.12■■□□□ 1.61
COL13A1-202ENST00000357811 FOXD4L6Q3SYB3 417 aaPredicted RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 FOXD4L3Q6VB84 417 aaPredicted RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 MAP4K4O95819 1239 aaPredicted RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 LRRFIP2Q9Y608 721 aaKnown RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
COL13A1-202ENST00000357811 ERC2O15083 957 aa25.11■■□□□ 1.61
COL13A1-202ENST00000357811 EIF2S2P20042 333 aaKnown RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 CCT4P50991 539 aaKnown RBP25.11■■□□□ 1.61
COL13A1-202ENST00000357811 NEK4P51957 841 aa25.11■■□□□ 1.61
COL13A1-202ENST00000357811 CAVIN1Q6NZI2 390 aaKnown RBP25.1■■□□□ 1.61
COL13A1-202ENST00000357811 ST18O60284 1047 aa25.1■■□□□ 1.61
COL13A1-202ENST00000357811 FLT4P35916 1363 aa25.1■■□□□ 1.61
COL13A1-202ENST00000357811 CEP170BQ9Y4F5 1589 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms