RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 MTHFSDQ2M296 383 aaKnown RBP18.96■□□□□ 0.63
PTBP1-203ENST00000356948 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
PTBP1-203ENST00000356948 CEP85Q6P2H3 762 aa18.95■□□□□ 0.62
PTBP1-203ENST00000356948 FSD2A1L4K1 749 aa18.94■□□□□ 0.62
PTBP1-203ENST00000356948 CALD1Q05682 793 aaKnown RBP18.94■□□□□ 0.62
PTBP1-203ENST00000356948 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
PTBP1-203ENST00000356948 CHL1O00533 1208 aa18.94■□□□□ 0.62
PTBP1-203ENST00000356948 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
PTBP1-203ENST00000356948 RIMS1Q86UR5 1692 aaKnown RBP18.94■□□□□ 0.62
PTBP1-203ENST00000356948 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
PTBP1-203ENST00000356948 SPATA31D1Q6ZQQ2 1576 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 AATKQ6ZMQ8 1374 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 SDSP20132 328 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 LTV1Q96GA3 475 aaPredicted RBP18.93■□□□□ 0.62
PTBP1-203ENST00000356948 NCOA3Q9Y6Q9 1424 aa18.93■□□□□ 0.62
PTBP1-203ENST00000356948 SNX21Q969T3 373 aa18.92■□□□□ 0.62
PTBP1-203ENST00000356948 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
PTBP1-203ENST00000356948 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
PTBP1-203ENST00000356948 EXOC6BQ9Y2D4 811 aa18.92■□□□□ 0.62
PTBP1-203ENST00000356948 TTC22Q5TAA0 569 aa18.91■□□□□ 0.62
PTBP1-203ENST00000356948 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
PTBP1-203ENST00000356948 CDC45O75419 566 aa18.91■□□□□ 0.62
PTBP1-203ENST00000356948 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
PTBP1-203ENST00000356948 FOXD4L5Q5VV16 416 aaPredicted RBP18.9■□□□□ 0.62
PTBP1-203ENST00000356948 FOXD4L4Q8WXT5 416 aaPredicted RBP18.9■□□□□ 0.62
PTBP1-203ENST00000356948 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
PTBP1-203ENST00000356948 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
PTBP1-203ENST00000356948 ANKRD44Q8N8A2 993 aa18.9■□□□□ 0.62
PTBP1-203ENST00000356948 RTL1A6NKG5 1358 aa18.9■□□□□ 0.62
PTBP1-203ENST00000356948 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
PTBP1-203ENST00000356948 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
PTBP1-203ENST00000356948 TSPYL4Q9UJ04 414 aa18.89■□□□□ 0.61
PTBP1-203ENST00000356948 PEAK1Q9H792 1746 aa18.89■□□□□ 0.61
PTBP1-203ENST00000356948 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
PTBP1-203ENST00000356948 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTBP1-203ENST00000356948 EYA1Q99502 592 aa18.88■□□□□ 0.61
PTBP1-203ENST00000356948 DTNBO60941 627 aa18.87■□□□□ 0.61
PTBP1-203ENST00000356948 TRIM44Q96DX7 344 aaPredicted RBP18.87■□□□□ 0.61
PTBP1-203ENST00000356948 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
PTBP1-203ENST00000356948 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
PTBP1-203ENST00000356948 PTPRUQ92729 1446 aa18.87■□□□□ 0.61
PTBP1-203ENST00000356948 C3P01024 1663 aa18.87■□□□□ 0.61
PTBP1-203ENST00000356948 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
PTBP1-203ENST00000356948 TMEM2Q9UHN6 1383 aa18.86■□□□□ 0.61
PTBP1-203ENST00000356948 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
PTBP1-203ENST00000356948 GRPEL1Q9HAV7 217 aa18.86■□□□□ 0.61
PTBP1-203ENST00000356948 AMOTL2Q9Y2J4 779 aa18.86■□□□□ 0.61
PTBP1-203ENST00000356948 TNRQ92752 1358 aa18.85■□□□□ 0.61
PTBP1-203ENST00000356948 CRB1P82279 1406 aa18.85■□□□□ 0.61
PTBP1-203ENST00000356948 PNMA6EA0A0J9YXQ4 647 aa18.85■□□□□ 0.61
PTBP1-203ENST00000356948 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
PTBP1-203ENST00000356948 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
PTBP1-203ENST00000356948 ZBTB7CA1YPR0 619 aa18.84■□□□□ 0.61
PTBP1-203ENST00000356948 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
PTBP1-203ENST00000356948 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
PTBP1-203ENST00000356948 AMPHP49418 695 aa18.83■□□□□ 0.61
PTBP1-203ENST00000356948 OVOS2A0A0J9YW53 1432 aa18.83■□□□□ 0.6
PTBP1-203ENST00000356948 USP6P35125 1406 aa18.83■□□□□ 0.6
PTBP1-203ENST00000356948 OVOS2Q6IE36 1432 aa18.83■□□□□ 0.6
PTBP1-203ENST00000356948 DDX11L8A8MPP1 907 aa18.82■□□□□ 0.6
PTBP1-203ENST00000356948 CEP170BQ9Y4F5 1589 aaPredicted RBP18.82■□□□□ 0.6
PTBP1-203ENST00000356948 AGLP35573 1532 aa18.82■□□□□ 0.6
PTBP1-203ENST00000356948 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 IL25Q9H293 177 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
PTBP1-203ENST00000356948 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 RTF1Q92541 710 aaKnown RBP18.81■□□□□ 0.6
PTBP1-203ENST00000356948 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 NLRP6P59044 892 aa18.81■□□□□ 0.6
PTBP1-203ENST00000356948 FOXD4L6Q3SYB3 417 aaPredicted RBP18.81■□□□□ 0.6
PTBP1-203ENST00000356948 FOXD4L3Q6VB84 417 aaPredicted RBP18.81■□□□□ 0.6
PTBP1-203ENST00000356948 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
PTBP1-203ENST00000356948 BAG4O95429 457 aaKnown RBP18.8■□□□□ 0.6
PTBP1-203ENST00000356948 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
PTBP1-203ENST00000356948 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
PTBP1-203ENST00000356948 AKAP12Q02952 1782 aa18.8■□□□□ 0.6
PTBP1-203ENST00000356948 FKBP5Q13451 457 aaPredicted RBP18.8■□□□□ 0.6
PTBP1-203ENST00000356948 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
PTBP1-203ENST00000356948 PALD1Q9ULE6 856 aa18.8■□□□□ 0.6
PTBP1-203ENST00000356948 ANXA1P04083 346 aa18.79■□□□□ 0.6
PTBP1-203ENST00000356948 PHAXQ9H814 394 aaKnown RBP18.79■□□□□ 0.6
PTBP1-203ENST00000356948 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
PTBP1-203ENST00000356948 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
PTBP1-203ENST00000356948 TECPR2O15040 1411 aa18.79■□□□□ 0.6
PTBP1-203ENST00000356948 PDE1AP54750 535 aa18.78■□□□□ 0.6
PTBP1-203ENST00000356948 IL17REQ8NFR9 667 aa18.78■□□□□ 0.6
PTBP1-203ENST00000356948 RBM27Q9P2N5 1060 aaKnown RBP18.78■□□□□ 0.6
PTBP1-203ENST00000356948 GBP4Q96PP9 640 aa18.77■□□□□ 0.6
PTBP1-203ENST00000356948 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
PTBP1-203ENST00000356948 TPRNQ4KMQ1 711 aa18.77■□□□□ 0.6
PTBP1-203ENST00000356948 RILPL2Q969X0 211 aa18.77■□□□□ 0.59
PTBP1-203ENST00000356948 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.59
PTBP1-203ENST00000356948 DDX49Q9Y6V7 483 aaKnown RBP18.77■□□□□ 0.59
PTBP1-203ENST00000356948 MRE11P49959 708 aa18.76■□□□□ 0.59
PTBP1-203ENST00000356948 LARP6Q9BRS8 491 aaKnown RBP18.76■□□□□ 0.59
PTBP1-203ENST00000356948 RGPD8O14715 1765 aaPredicted RBP18.76■□□□□ 0.59
PTBP1-203ENST00000356948 FLIIQ13045 1269 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms