RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 MX1P20591 662 aa19■□□□□ 0.63
PTPN11-201ENST00000351677 CASTP20810 708 aaKnown RBP19■□□□□ 0.63
PTPN11-201ENST00000351677 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
PTPN11-201ENST00000351677 TRIM27P14373 513 aa19■□□□□ 0.63
PTPN11-201ENST00000351677 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
PTPN11-201ENST00000351677 ABCC11Q96J66 1382 aa18.99■□□□□ 0.63
PTPN11-201ENST00000351677 SLC3A2P08195 630 aaKnown RBP18.99■□□□□ 0.63
PTPN11-201ENST00000351677 EPS15P42566 896 aa18.99■□□□□ 0.63
PTPN11-201ENST00000351677 UPF3BQ9BZI7 483 aaKnown RBP18.99■□□□□ 0.63
PTPN11-201ENST00000351677 SCAF11Q99590 1463 aaKnown RBP18.99■□□□□ 0.63
PTPN11-201ENST00000351677 RBM10P98175 930 aaKnown RBP18.99■□□□□ 0.63
PTPN11-201ENST00000351677 IDI1Q13907 227 aa18.99■□□□□ 0.63
PTPN11-201ENST00000351677 SPATA32Q96LK8 384 aa18.99■□□□□ 0.63
PTPN11-201ENST00000351677 GNL3LQ9NVN8 582 aaKnown RBP18.99■□□□□ 0.63
PTPN11-201ENST00000351677 NOS1P29475 1434 aa18.99■□□□□ 0.63
PTPN11-201ENST00000351677 NUP133Q8WUM0 1156 aa18.98■□□□□ 0.63
PTPN11-201ENST00000351677 MPHOSPH8Q99549 860 aa18.98■□□□□ 0.63
PTPN11-201ENST00000351677 CEP126Q9P2H0 1117 aa18.98■□□□□ 0.63
PTPN11-201ENST00000351677 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
PTPN11-201ENST00000351677 CCDC69A6NI79 296 aa18.98■□□□□ 0.63
PTPN11-201ENST00000351677 KLHL34Q8N239 644 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 KIF1BPQ96EK5 621 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 ZSCAN31Q96LW9 406 aaPredicted RBP18.97■□□□□ 0.63
PTPN11-201ENST00000351677 NACAP1Q9BZK3 213 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
PTPN11-201ENST00000351677 OFD1O75665 1012 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 JMYQ8N9B5 988 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 SERPINC1P01008 464 aa18.97■□□□□ 0.63
PTPN11-201ENST00000351677 TRIM22Q8IYM9 498 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 RUFY1Q96T51 708 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 SETQ01105 290 aaPredicted RBP18.96■□□□□ 0.63
PTPN11-201ENST00000351677 FILIP1LQ4L180 1135 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 CAGE1Q8TC20 777 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 DDX11Q96FC9 970 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
PTPN11-201ENST00000351677 TXLNAP40222 546 aa18.96■□□□□ 0.62
PTPN11-201ENST00000351677 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-201ENST00000351677 NUTM2BA6NNL0 878 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-201ENST00000351677 NUTM2EB1AL46 878 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-201ENST00000351677 NUTM2AQ8IVF1 878 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-201ENST00000351677 IGHDP01880 384 aa18.95■□□□□ 0.62
PTPN11-201ENST00000351677 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
PTPN11-201ENST00000351677 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
PTPN11-201ENST00000351677 SYCE3A1L190 88 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 CCDC83Q8IWF9 413 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 CDK5RAP3Q96JB5 506 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
PTPN11-201ENST00000351677 KCNH5Q8NCM2 988 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 ZSCAN25Q6NSZ9 544 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 TBC1D2Q9BYX2 928 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 FERMT3Q86UX7 667 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 BOLA2Q9H3K6 86 aa18.94■□□□□ 0.62
PTPN11-201ENST00000351677 PATL2C9JE40 543 aaKnown RBP18.93■□□□□ 0.62
PTPN11-201ENST00000351677 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 NUP62CLQ9H1M0 184 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 LRRFIP2Q9Y608 721 aaKnown RBP18.93■□□□□ 0.62
PTPN11-201ENST00000351677 HSP90B2PQ58FF3 399 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 KRT32Q14532 448 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 MAGEC2Q9UBF1 373 aaPredicted RBP18.93■□□□□ 0.62
PTPN11-201ENST00000351677 ZNF608Q9ULD9 1512 aaPredicted RBP18.93■□□□□ 0.62
PTPN11-201ENST00000351677 RAB11FIP3O75154 756 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
PTPN11-201ENST00000351677 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
PTPN11-201ENST00000351677 PTCD1O75127 700 aaKnown RBP18.92■□□□□ 0.62
PTPN11-201ENST00000351677 CT47A1Q5JQC4 288 aaPredicted RBP18.92■□□□□ 0.62
PTPN11-201ENST00000351677 MPRIPQ6WCQ1 1025 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 IDH1O75874 414 aaKnown RBP18.92■□□□□ 0.62
PTPN11-201ENST00000351677 SMARCE1Q969G3 411 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 AK7Q96M32 723 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 MYD88Q99836 296 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 ACBD3Q9H3P7 528 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 FBLN1P23142 703 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 CTNNA3Q9UI47 895 aa18.92■□□□□ 0.62
PTPN11-201ENST00000351677 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
PTPN11-201ENST00000351677 TDO2P48775 406 aa18.91■□□□□ 0.62
PTPN11-201ENST00000351677 POGZQ7Z3K3 1410 aa18.91■□□□□ 0.62
PTPN11-201ENST00000351677 CFAP45Q9UL16 551 aa18.91■□□□□ 0.62
PTPN11-201ENST00000351677 C14orf93Q9H972 538 aaKnown RBP18.91■□□□□ 0.62
PTPN11-201ENST00000351677 HMGN5P82970 282 aaKnown RBP18.91■□□□□ 0.62
PTPN11-201ENST00000351677 CAMK4Q16566 473 aa18.9■□□□□ 0.62
PTPN11-201ENST00000351677 ESPNB1AK53 854 aa18.9■□□□□ 0.62
PTPN11-201ENST00000351677 MTERF4Q7Z6M4 381 aaKnown RBP18.9■□□□□ 0.62
PTPN11-201ENST00000351677 GPATCH8Q9UKJ3 1502 aaKnown RBP18.9■□□□□ 0.62
PTPN11-201ENST00000351677 SSFA2P28290 1259 aa18.9■□□□□ 0.62
PTPN11-201ENST00000351677 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
PTPN11-201ENST00000351677 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
PTPN11-201ENST00000351677 MAP7D2Q96T17 732 aa18.89■□□□□ 0.61
PTPN11-201ENST00000351677 CCP110O43303 1012 aa18.89■□□□□ 0.61
PTPN11-201ENST00000351677 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
PTPN11-201ENST00000351677 MBIPQ9NS73 344 aa18.88■□□□□ 0.61
PTPN11-201ENST00000351677 RAI14Q9P0K7 980 aa18.88■□□□□ 0.61
PTPN11-201ENST00000351677 LARP6Q9BRS8 491 aaKnown RBP18.88■□□□□ 0.61
PTPN11-201ENST00000351677 KRT18P05783 430 aaKnown RBP18.88■□□□□ 0.61
PTPN11-201ENST00000351677 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
PTPN11-201ENST00000351677 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
PTPN11-201ENST00000351677 CDKL5O76039 1030 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 FAM177A1Q8N128 213 aaPredicted RBP18.87■□□□□ 0.61
PTPN11-201ENST00000351677 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
PTPN11-201ENST00000351677 PIBF1Q8WXW3 757 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms