RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 RRP1P56182 461 aaKnown RBP12.11□□□□□ -0.47
ATG4A-202ENST00000345734 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
ATG4A-202ENST00000345734 ACEP12821 1306 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 IQSEC2Q5JU85 1478 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
ATG4A-202ENST00000345734 TCP11L2Q8N4U5 519 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 PIK3R4Q99570 1358 aa12.11□□□□□ -0.47
ATG4A-202ENST00000345734 PNPLA6Q8IY17 1366 aa12.1□□□□□ -0.47
ATG4A-202ENST00000345734 NRKQ7Z2Y5 1582 aa12.1□□□□□ -0.47
ATG4A-202ENST00000345734 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
ATG4A-202ENST00000345734 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
ATG4A-202ENST00000345734 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
ATG4A-202ENST00000345734 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
ATG4A-202ENST00000345734 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
ATG4A-202ENST00000345734 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
ATG4A-202ENST00000345734 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.47
ATG4A-202ENST00000345734 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.47
ATG4A-202ENST00000345734 NGEFQ8N5V2 710 aa12.08□□□□□ -0.47
ATG4A-202ENST00000345734 COG3Q96JB2 828 aa12.08□□□□□ -0.47
ATG4A-202ENST00000345734 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.47
ATG4A-202ENST00000345734 G3V3G9 751 aa12.08□□□□□ -0.48
ATG4A-202ENST00000345734 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
ATG4A-202ENST00000345734 AK7Q96M32 723 aa12.08□□□□□ -0.48
ATG4A-202ENST00000345734 USP6P35125 1406 aa12.07□□□□□ -0.48
ATG4A-202ENST00000345734 E9PSI1 815 aa12.07□□□□□ -0.48
ATG4A-202ENST00000345734 PLIN1O60240 522 aa12.07□□□□□ -0.48
ATG4A-202ENST00000345734 RRS1Q15050 365 aaKnown RBP12.07□□□□□ -0.48
ATG4A-202ENST00000345734 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
ATG4A-202ENST00000345734 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
ATG4A-202ENST00000345734 NPHP4O75161 1426 aaPredicted RBP12.06□□□□□ -0.48
ATG4A-202ENST00000345734 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
ATG4A-202ENST00000345734 FMN2Q9NZ56 1722 aa12.06□□□□□ -0.48
ATG4A-202ENST00000345734 KIF3CO14782 793 aa12.06□□□□□ -0.48
ATG4A-202ENST00000345734 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
ATG4A-202ENST00000345734 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
ATG4A-202ENST00000345734 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
ATG4A-202ENST00000345734 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
ATG4A-202ENST00000345734 MAP3K9P80192 1104 aa12.05□□□□□ -0.48
ATG4A-202ENST00000345734 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
ATG4A-202ENST00000345734 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
ATG4A-202ENST00000345734 PLCG2P16885 1265 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 NGDNQ8NEJ9 315 aaKnown RBP12.04□□□□□ -0.48
ATG4A-202ENST00000345734 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
ATG4A-202ENST00000345734 OVOS2A0A0J9YW53 1432 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 OVOS2Q6IE36 1432 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 DDX12PQ92771 950 aa12.04□□□□□ -0.48
ATG4A-202ENST00000345734 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
ATG4A-202ENST00000345734 GPR37O15354 613 aa12.03□□□□□ -0.48
ATG4A-202ENST00000345734 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.48
ATG4A-202ENST00000345734 IL13P35225 146 aa12.02□□□□□ -0.48
ATG4A-202ENST00000345734 TMPOP42166 694 aaKnown RBP12.02□□□□□ -0.48
ATG4A-202ENST00000345734 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
ATG4A-202ENST00000345734 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
ATG4A-202ENST00000345734 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
ATG4A-202ENST00000345734 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
ATG4A-202ENST00000345734 TRIM66O15016 1216 aa12.01□□□□□ -0.49
ATG4A-202ENST00000345734 HMOX1P09601 288 aa12.01□□□□□ -0.49
ATG4A-202ENST00000345734 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
ATG4A-202ENST00000345734 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
ATG4A-202ENST00000345734 FCHSD2O94868 740 aa12.01□□□□□ -0.49
ATG4A-202ENST00000345734 TTC21AQ8NDW8 1320 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 PIK3C2AO00443 1686 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 PEAK1Q9H792 1746 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 PRKAR2BP31323 418 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 PDE4DQ08499 809 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 USP31Q70CQ4 1352 aa12□□□□□ -0.49
ATG4A-202ENST00000345734 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 BCAR3O75815 825 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 RIPK4P57078 832 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 IER5LQ5T953 404 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
ATG4A-202ENST00000345734 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
ATG4A-202ENST00000345734 SEC24BO95487 1268 aa11.98□□□□□ -0.49
ATG4A-202ENST00000345734 NWD1Q149M9 1564 aa11.98□□□□□ -0.49
ATG4A-202ENST00000345734 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
ATG4A-202ENST00000345734 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
ATG4A-202ENST00000345734 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
ATG4A-202ENST00000345734 FECHP22830 423 aa11.96□□□□□ -0.49
ATG4A-202ENST00000345734 HSP90AB2PQ58FF8 381 aa11.96□□□□□ -0.49
ATG4A-202ENST00000345734 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.5
ATG4A-202ENST00000345734 MYH16Q9H6N6 1097 aa11.96□□□□□ -0.5
ATG4A-202ENST00000345734 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.5
ATG4A-202ENST00000345734 OSBPP22059 807 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 ESCO1Q5FWF5 840 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 HSPA2P54652 639 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
ATG4A-202ENST00000345734 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
ATG4A-202ENST00000345734 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 FANCIQ9NVI1 1328 aa11.95□□□□□ -0.5
ATG4A-202ENST00000345734 EIF5BO60841 1220 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms