RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 PPIP5K1Q6PFW1 1433 aa18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 STARD3NLO95772 234 aa18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
CARMIL3-201ENST00000342740 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 MX1P20591 662 aa18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 PTPRCP08575 1304 aa18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 FKBP4Q02790 459 aaKnown RBP eCLIP18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.71■□□□□ 0.59
CARMIL3-201ENST00000342740 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
CARMIL3-201ENST00000342740 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
CARMIL3-201ENST00000342740 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
CARMIL3-201ENST00000342740 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
CARMIL3-201ENST00000342740 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
CARMIL3-201ENST00000342740 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
CARMIL3-201ENST00000342740 CEP170Q5SW79 1584 aa18.69■□□□□ 0.58
CARMIL3-201ENST00000342740 EIF2AK4Q9P2K8 1649 aaKnown RBP18.69■□□□□ 0.58
CARMIL3-201ENST00000342740 GNL3LQ9NVN8 582 aaKnown RBP18.69■□□□□ 0.58
CARMIL3-201ENST00000342740 UHRF1BP1Q6BDS2 1440 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 RAB11FIP3O75154 756 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 MBD3O95983 291 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 MYD88Q99836 296 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 GLRX3O76003 335 aaKnown RBP18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 IGHDP01880 384 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 HOOK1Q9UJC3 728 aaKnown RBP18.68■□□□□ 0.58
CARMIL3-201ENST00000342740 ARID3AQ99856 593 aa18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 HYPKQ9NX55 129 aa18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 MRE11P49959 708 aa18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 BLOC1S2Q6QNY1 142 aa18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 SDF4Q9BRK5 362 aa18.67■□□□□ 0.58
CARMIL3-201ENST00000342740 FIBPO43427 364 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 CHRNA2Q15822 529 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 KDM4AO75164 1064 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 ANKRD1Q15327 319 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 RNF214Q8ND24 703 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 TPM3P06753 285 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 IFNL2Q8IZJ0 200 aa18.66■□□□□ 0.58
CARMIL3-201ENST00000342740 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 STK3Q13188 491 aa18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 XBP1P17861 261 aa18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 TSR1Q2NL82 804 aaKnown RBP18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
CARMIL3-201ENST00000342740 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.58
CARMIL3-201ENST00000342740 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.58
CARMIL3-201ENST00000342740 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
CARMIL3-201ENST00000342740 NCKAP5LQ9HCH0 1330 aa18.64■□□□□ 0.57
CARMIL3-201ENST00000342740 ATP7AQ04656 1500 aa18.64■□□□□ 0.57
CARMIL3-201ENST00000342740 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
CARMIL3-201ENST00000342740 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
CARMIL3-201ENST00000342740 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 TPM1P09493 284 aa18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 CCDC47Q96A33 483 aaKnown RBP18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 NACAP1Q9BZK3 213 aa18.63■□□□□ 0.57
CARMIL3-201ENST00000342740 ATP2B1P20020 1258 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 ZSCAN25Q6NSZ9 544 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 PCDHB15Q9Y5E8 787 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 ANXA1P04083 346 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 NPATQ14207 1427 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 BRMS1Q9HCU9 246 aa18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
CARMIL3-201ENST00000342740 A0A087WZG4 1122 aa18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 KCNA6P17658 529 aa18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 LARP1BQ659C4 914 aaKnown RBP18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 BICDL1Q6ZP65 573 aa18.61■□□□□ 0.57
CARMIL3-201ENST00000342740 MAP3K2Q9Y2U5 619 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 TBX22Q9Y458 520 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 CTDP1Q9Y5B0 961 aaPredicted RBP18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 SLC3A2P08195 630 aaKnown RBP18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 ANKRD20A12PQ8NF67 263 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 CTNNA3Q9UI47 895 aa18.6■□□□□ 0.57
CARMIL3-201ENST00000342740 TPM2P07951 284 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 KRT32Q14532 448 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms