RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 ATF7IPQ6VMQ6 1270 aa17.94■□□□□ 0.46
COL11A2-201ENST00000341947 TSPYL1Q9H0U9 437 aa17.94■□□□□ 0.46
COL11A2-201ENST00000341947 K7ELQ4 463 aaPredicted RBP17.94■□□□□ 0.46
COL11A2-201ENST00000341947 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 NEBLO76041 1014 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
COL11A2-201ENST00000341947 CEP57L1Q8IYX8 460 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 RPGRIP1LQ68CZ1 1315 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 ERBINQ96RT1 1412 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 MVPQ14764 893 aaKnown RBP17.93■□□□□ 0.46
COL11A2-201ENST00000341947 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
COL11A2-201ENST00000341947 JAKMIP1Q96N16 626 aaKnown RBP17.93■□□□□ 0.46
COL11A2-201ENST00000341947 LEKR1Q6ZMV7 388 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 TRIM21P19474 475 aaKnown RBP17.92■□□□□ 0.46
COL11A2-201ENST00000341947 USP5P45974 858 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 RRS1Q15050 365 aaKnown RBP17.92■□□□□ 0.46
COL11A2-201ENST00000341947 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 CHD1LQ86WJ1 897 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 ZNF652Q9Y2D9 606 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
COL11A2-201ENST00000341947 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 CFAP45Q9UL16 551 aa17.92■□□□□ 0.46
COL11A2-201ENST00000341947 IDH1O75874 414 aaKnown RBP17.92■□□□□ 0.46
COL11A2-201ENST00000341947 IMMTQ16891 758 aaKnown RBP17.92■□□□□ 0.46
COL11A2-201ENST00000341947 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
COL11A2-201ENST00000341947 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
COL11A2-201ENST00000341947 GNAT3A8MTJ3 354 aa17.91■□□□□ 0.46
COL11A2-201ENST00000341947 CEP131Q9UPN4 1083 aa17.9■□□□□ 0.46
COL11A2-201ENST00000341947 HMGN5P82970 282 aaKnown RBP17.9■□□□□ 0.46
COL11A2-201ENST00000341947 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
COL11A2-201ENST00000341947 KCNH5Q8NCM2 988 aa17.9■□□□□ 0.46
COL11A2-201ENST00000341947 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
COL11A2-201ENST00000341947 TNIP1Q15025 636 aa17.9■□□□□ 0.46
COL11A2-201ENST00000341947 IQCEQ6IPM2 695 aa17.89■□□□□ 0.46
COL11A2-201ENST00000341947 PIBF1Q8WXW3 757 aa17.89■□□□□ 0.46
COL11A2-201ENST00000341947 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.45
COL11A2-201ENST00000341947 METTL24Q5JXM2 366 aa17.89■□□□□ 0.45
COL11A2-201ENST00000341947 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.45
COL11A2-201ENST00000341947 CFTRP13569 1480 aa17.89■□□□□ 0.45
COL11A2-201ENST00000341947 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
COL11A2-201ENST00000341947 AKAP2Q9Y2D5 859 aa17.89■□□□□ 0.45
COL11A2-201ENST00000341947 FCHSD2O94868 740 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 DNAI2Q9GZS0 605 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
COL11A2-201ENST00000341947 ERLIN1O75477 346 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 ZPR1O75312 459 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
COL11A2-201ENST00000341947 ABCF2Q9UG63 623 aa17.88■□□□□ 0.45
COL11A2-201ENST00000341947 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
COL11A2-201ENST00000341947 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
COL11A2-201ENST00000341947 POTEJP0CG39 1038 aa17.87■□□□□ 0.45
COL11A2-201ENST00000341947 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
COL11A2-201ENST00000341947 EZRP15311 586 aaKnown RBP17.87■□□□□ 0.45
COL11A2-201ENST00000341947 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
COL11A2-201ENST00000341947 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
COL11A2-201ENST00000341947 SMTNL1A8MU46 457 aa17.86■□□□□ 0.45
COL11A2-201ENST00000341947 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
COL11A2-201ENST00000341947 JAKMIP3Q5VZ66 844 aa17.86■□□□□ 0.45
COL11A2-201ENST00000341947 CCDC66A2RUB6 948 aa17.86■□□□□ 0.45
COL11A2-201ENST00000341947 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
COL11A2-201ENST00000341947 GBP2P32456 591 aaPredicted RBP17.86■□□□□ 0.45
COL11A2-201ENST00000341947 PPP1R12BO60237 982 aaPredicted RBP17.86■□□□□ 0.45
COL11A2-201ENST00000341947 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
COL11A2-201ENST00000341947 NUP62CLQ9H1M0 184 aa17.86■□□□□ 0.45
COL11A2-201ENST00000341947 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
COL11A2-201ENST00000341947 TAF4BQ92750 862 aa17.85■□□□□ 0.45
COL11A2-201ENST00000341947 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
COL11A2-201ENST00000341947 UPF3BQ9BZI7 483 aaKnown RBP17.85■□□□□ 0.45
COL11A2-201ENST00000341947 GOLGA6L7A0A1B0GV03 622 aa17.85■□□□□ 0.45
COL11A2-201ENST00000341947 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
COL11A2-201ENST00000341947 TAX1BP1Q86VP1 789 aa17.85■□□□□ 0.45
COL11A2-201ENST00000341947 SSR1P43307 286 aaKnown RBP17.84■□□□□ 0.45
COL11A2-201ENST00000341947 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 FAM177A1Q8N128 213 aaPredicted RBP17.84■□□□□ 0.45
COL11A2-201ENST00000341947 CCDC112Q8NEF3 446 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
COL11A2-201ENST00000341947 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 SCLT1Q96NL6 688 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 EIF3JO75822 258 aaKnown RBP17.84■□□□□ 0.45
COL11A2-201ENST00000341947 KIAA0754O94854 1291 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
COL11A2-201ENST00000341947 CENPHQ9H3R5 247 aa17.84■□□□□ 0.45
COL11A2-201ENST00000341947 KIAA1328Q86T90 577 aa17.83■□□□□ 0.45
COL11A2-201ENST00000341947 ZNF397Q8NF99 534 aaPredicted RBP17.83■□□□□ 0.44
COL11A2-201ENST00000341947 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.44
COL11A2-201ENST00000341947 CASTP20810 708 aaKnown RBP17.83■□□□□ 0.44
COL11A2-201ENST00000341947 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
COL11A2-201ENST00000341947 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
COL11A2-201ENST00000341947 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
COL11A2-201ENST00000341947 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
COL11A2-201ENST00000341947 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
COL11A2-201ENST00000341947 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 DZIP1Q86YF9 867 aaKnown RBP17.81■□□□□ 0.44
COL11A2-201ENST00000341947 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 CETN2P41208 172 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 EFCAB5A4FU69 1503 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms