RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GOLGA6L19H0YKK7 550 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 NEK4P51957 841 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 HSP90AB2PQ58FF8 381 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 FBLN1P23142 703 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 HYPKQ9NX55 129 aa23.54■■□□□ 1.36
SEMA6C-201ENST00000341697 ZSCAN25Q6NSZ9 544 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 HSPA2P54652 639 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 IL1RAPL2Q9NP60 686 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 ZPR1O75312 459 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 MCM2P49736 904 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 MYD88Q99836 296 aa23.53■■□□□ 1.36
SEMA6C-201ENST00000341697 NEO1Q92859 1461 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 XBP1P17861 261 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 RABEP1Q15276 862 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 PZPP20742 1482 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 ARHGEF12Q9NZN5 1544 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 FOSBP53539 338 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 NACAP1Q9BZK3 213 aa23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 CCDC47Q96A33 483 aaKnown RBP23.52■■□□□ 1.36
SEMA6C-201ENST00000341697 PES1O00541 588 aaKnown RBP23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 CCDC85AQ96PX6 553 aaPredicted RBP23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 SAMD1Q6SPF0 538 aaPredicted RBP23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 DNAAF4Q8WXU2 420 aa23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 BRMS1Q9HCU9 246 aa23.51■■□□□ 1.35
SEMA6C-201ENST00000341697 KCNA6P17658 529 aa23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 HSP90AB3PQ58FF7 597 aa23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 UBAP1LF5GYI3 381 aa23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 TESK2Q96S53 571 aa23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 TEX13AQ9BXU3 409 aaPredicted RBP23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 HOOK1Q9UJC3 728 aaKnown RBP23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 MAST1Q9Y2H9 1570 aa23.5■■□□□ 1.35
SEMA6C-201ENST00000341697 IL16Q14005 1332 aa23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 MAP4K4O95819 1239 aaPredicted RBP23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 RRP12Q5JTH9 1297 aaKnown RBP23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 EXOC6BQ9Y2D4 811 aa23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 MTMR7Q9Y216 660 aa23.49■■□□□ 1.35
SEMA6C-201ENST00000341697 KIF1BPQ96EK5 621 aa23.48■■□□□ 1.35
SEMA6C-201ENST00000341697 DCAF8L1A6NGE4 600 aa23.48■■□□□ 1.35
SEMA6C-201ENST00000341697 PTPRCP08575 1304 aa23.47■■□□□ 1.35
SEMA6C-201ENST00000341697 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
SEMA6C-201ENST00000341697 F6X3S4 739 aa23.47■■□□□ 1.35
SEMA6C-201ENST00000341697 RAB11FIP3O75154 756 aa23.47■■□□□ 1.35
SEMA6C-201ENST00000341697 FLIIQ13045 1269 aa23.47■■□□□ 1.35
SEMA6C-201ENST00000341697 MBIPQ9NS73 344 aa23.46■■□□□ 1.35
SEMA6C-201ENST00000341697 TPM2P07951 284 aa23.46■■□□□ 1.35
SEMA6C-201ENST00000341697 ABCC1P33527 1531 aa23.46■■□□□ 1.35
SEMA6C-201ENST00000341697 IKQ13123 557 aaPredicted RBP23.46■■□□□ 1.35
SEMA6C-201ENST00000341697 METTL24Q5JXM2 366 aa23.46■■□□□ 1.35
SEMA6C-201ENST00000341697 CWC22Q9HCG8 908 aaKnown RBP23.45■■□□□ 1.34
SEMA6C-201ENST00000341697 NPATQ14207 1427 aa23.45■■□□□ 1.34
SEMA6C-201ENST00000341697 CCDC73Q6ZRK6 1079 aa23.45■■□□□ 1.34
SEMA6C-201ENST00000341697 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
SEMA6C-201ENST00000341697 CYP46A1Q9Y6A2 500 aa23.45■■□□□ 1.34
SEMA6C-201ENST00000341697 TRPM2O94759 1503 aa23.44■■□□□ 1.34
SEMA6C-201ENST00000341697 PDCP20941 246 aa23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 POLKQ9UBT6 870 aa23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 NCBP3Q53F19 620 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 TSR1Q2NL82 804 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 ZCRB1Q8TBF4 217 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 UHRF1BP1Q6BDS2 1440 aa23.43■■□□□ 1.34
SEMA6C-201ENST00000341697 NUTM1Q86Y26 1132 aa23.42■■□□□ 1.34
SEMA6C-201ENST00000341697 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
SEMA6C-201ENST00000341697 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
SEMA6C-201ENST00000341697 RAI14Q9P0K7 980 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 FLT4P35916 1363 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 TRIM27P14373 513 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 IFIT5Q13325 482 aaKnown RBP23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 ANKRD1Q15327 319 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 C20orf194Q5TEA3 1177 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 LRP2BPQ9P2M1 347 aa23.41■■□□□ 1.34
SEMA6C-201ENST00000341697 TPM3P06753 285 aa23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 TPM1P09493 284 aa23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 CTNNA3Q9UI47 895 aa23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 A0A087WZG4 1122 aa23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 CCDC43Q96MW1 224 aaKnown RBP23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 CWC27Q6UX04 472 aaKnown RBP23.4■■□□□ 1.34
SEMA6C-201ENST00000341697 GLRX3O76003 335 aaKnown RBP23.39■■□□□ 1.34
SEMA6C-201ENST00000341697 ZBTB3Q9H5J0 574 aa23.39■■□□□ 1.34
SEMA6C-201ENST00000341697 PARD3Q8TEW0 1356 aa23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 MX1P20591 662 aa23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 LRRFIP2Q9Y608 721 aaKnown RBP23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 POLR3AO14802 1390 aaPredicted RBP23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 BACH2Q9BYV9 841 aa23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 ANKRD20A12PQ8NF67 263 aa23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 ZFYVE16Q7Z3T8 1539 aa23.39■■□□□ 1.33
SEMA6C-201ENST00000341697 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 IFIT1P09914 478 aaKnown RBP23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 GSE1Q14687 1217 aa23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 PIK3R4Q99570 1358 aa23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 IDH1O75874 414 aaKnown RBP23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 A0A1W2PP64 1363 aa23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 RBM5P52756 815 aaKnown RBP eCLIP23.38■■□□□ 1.33
SEMA6C-201ENST00000341697 CABLES1Q8TDN4 633 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms