RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 DNAJC2Q99543 621 aaKnown RBP9.15□□□□□ -0.95
ATP2B4-201ENST00000341360 TMOD3Q9NYL9 352 aa9.15□□□□□ -0.95
ATP2B4-201ENST00000341360 TTC21AQ8NDW8 1320 aa9.15□□□□□ -0.95
ATP2B4-201ENST00000341360 SCAF11Q99590 1463 aaKnown RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 A0A087WZG4 1122 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 IFIT1P09914 478 aaKnown RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 HOMER1Q86YM7 354 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 ERCC4Q92889 916 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 BMP2KQ9NSY1 1161 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 ABCA5Q8WWZ7 1642 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 WDR33Q9C0J8 1336 aaKnown RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 SETQ01105 290 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 SLFN5Q08AF3 891 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 TAF7Q15545 349 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 KIF1BPQ96EK5 621 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 TOM1O60784 492 aa9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 PPP1R1BQ9UD71 204 aaPredicted RBP9.14□□□□□ -0.95
ATP2B4-201ENST00000341360 TNRQ92752 1358 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 CCDC69A6NI79 296 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 NUP160Q12769 1436 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 STK38Q15208 465 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 AK7Q96M32 723 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 WDR62O43379 1518 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 URB2Q14146 1524 aaKnown RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 FYB1O15117 783 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 TMPOP42166 694 aaKnown RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 SYCP1Q15431 976 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 ZPR1O75312 459 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 NEK4P51957 841 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 PPP4R3BQ5MIZ7 849 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 BLOC1S2Q6QNY1 142 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 UBAC1Q9BSL1 405 aa9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 NOB1Q9ULX3 412 aaKnown RBP9.13□□□□□ -0.95
ATP2B4-201ENST00000341360 DESP17661 470 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 CAVIN4Q5BKX8 364 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 RUFY1Q96T51 708 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 AMOTL2Q9Y2J4 779 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 ZMYM4Q5VZL5 1548 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 KRT18P05783 430 aaKnown RBP9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 KRT85P78386 507 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 ZNHIT6Q9NWK9 470 aaKnown RBP9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 CFAP45Q9UL16 551 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 IL16Q14005 1332 aa9.12□□□□□ -0.95
ATP2B4-201ENST00000341360 SRGAP3O43295 1099 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 TNNT3P45378 269 aaPredicted RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 TRAF1Q13077 416 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 PTPRCP08575 1304 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 MSH6P52701 1360 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 SHANK2Q9UPX8 1470 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 HMGB1P09429 215 aaKnown RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 C14orf93Q9H972 538 aaKnown RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 DBF4Q9UBU7 674 aaPredicted RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 CCDC39Q9UFE4 941 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 PZPP20742 1482 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 LDHCP07864 332 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 CCAR2Q8N163 923 aaKnown RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 MNS1Q8NEH6 495 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 U3KPZ7 1027 aaPredicted RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 PLCH2O75038 1416 aa9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 RNF41Q9H4P4 317 aaPredicted RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 PHAXQ9H814 394 aaKnown RBP9.11□□□□□ -0.95
ATP2B4-201ENST00000341360 DUOX2Q9NRD8 1548 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 NPHP3Q7Z494 1330 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 IMMTQ16891 758 aaKnown RBP9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 AMER1Q5JTC6 1135 aaPredicted RBP9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 MTERF4Q7Z6M4 381 aaKnown RBP9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 EXOC5O00471 708 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 TNIP1Q15025 636 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 DUSP27Q5VZP5 1158 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 EIF2AK4Q9P2K8 1649 aaKnown RBP9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 GPATCH8Q9UKJ3 1502 aaKnown RBP9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 PLEKHH1Q9ULM0 1364 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 CBFA2T2O43439 604 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 SMC2O95347 1197 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 TDO2P48775 406 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 IFNL2Q8IZJ0 200 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 KDM5BQ9UGL1 1544 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 AACSQ86V21 672 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 CHD1LQ86WJ1 897 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 UBE2Q2Q8WVN8 375 aa9.1□□□□□ -0.95
ATP2B4-201ENST00000341360 HSP90B2PQ58FF3 399 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms