RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KDRP35968 1356 aa25.3■■□□□ 1.64
SPG7-202ENST00000341316 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
SPG7-202ENST00000341316 CHMP4BQ9H444 224 aaKnown RBP25.29■■□□□ 1.64
SPG7-202ENST00000341316 IGSF1Q8N6C5 1336 aa25.29■■□□□ 1.64
SPG7-202ENST00000341316 BRPF3Q9ULD4 1205 aa25.29■■□□□ 1.64
SPG7-202ENST00000341316 RGS12O14924 1447 aa25.28■■□□□ 1.64
SPG7-202ENST00000341316 KIAA0232Q92628 1395 aa25.28■■□□□ 1.64
SPG7-202ENST00000341316 ANKRD45Q5TZF3 282 aa25.26■■□□□ 1.63
SPG7-202ENST00000341316 MARF1Q9Y4F3 1742 aaKnown RBP25.26■■□□□ 1.63
SPG7-202ENST00000341316 GCC1Q96CN9 775 aa25.26■■□□□ 1.63
SPG7-202ENST00000341316 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
SPG7-202ENST00000341316 BECN1Q14457 450 aa25.24■■□□□ 1.63
SPG7-202ENST00000341316 INTS3Q68E01 1043 aaKnown RBP25.24■■□□□ 1.63
SPG7-202ENST00000341316 HOXC9P31274 260 aa25.23■■□□□ 1.63
SPG7-202ENST00000341316 ABTB2Q8N961 1025 aa25.23■■□□□ 1.63
SPG7-202ENST00000341316 KIF24Q5T7B8 1368 aa25.23■■□□□ 1.63
SPG7-202ENST00000341316 C22orf23Q9BZE7 217 aa25.22■■□□□ 1.63
SPG7-202ENST00000341316 RTF1Q92541 710 aaKnown RBP25.21■■□□□ 1.63
SPG7-202ENST00000341316 TBC1D2Q9BYX2 928 aa25.21■■□□□ 1.63
SPG7-202ENST00000341316 HAP1P54257 671 aaPredicted RBP25.2■■□□□ 1.63
SPG7-202ENST00000341316 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
SPG7-202ENST00000341316 TSPYL4Q9UJ04 414 aa25.2■■□□□ 1.62
SPG7-202ENST00000341316 ANKLE2Q86XL3 938 aa25.19■■□□□ 1.62
SPG7-202ENST00000341316 GAS2L2Q8NHY3 880 aa25.18■■□□□ 1.62
SPG7-202ENST00000341316 SLC4A2P04920 1241 aa25.17■■□□□ 1.62
SPG7-202ENST00000341316 PHF8Q9UPP1 1060 aa25.17■■□□□ 1.62
SPG7-202ENST00000341316 BMP2KLQ5H9B9 411 aa25.17■■□□□ 1.62
SPG7-202ENST00000341316 LTV1Q96GA3 475 aaPredicted RBP25.17■■□□□ 1.62
SPG7-202ENST00000341316 SLKQ9H2G2 1235 aaPredicted RBP25.17■■□□□ 1.62
SPG7-202ENST00000341316 CHD2O14647 1828 aaKnown RBP25.17■■□□□ 1.62
SPG7-202ENST00000341316 USP54Q70EL1 1684 aa25.17■■□□□ 1.62
SPG7-202ENST00000341316 PTPRCP08575 1304 aa25.16■■□□□ 1.62
SPG7-202ENST00000341316 G2E3Q7L622 706 aa25.16■■□□□ 1.62
SPG7-202ENST00000341316 MSH6P52701 1360 aa25.16■■□□□ 1.62
SPG7-202ENST00000341316 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
SPG7-202ENST00000341316 C14orf37Q86TY3 774 aa25.15■■□□□ 1.62
SPG7-202ENST00000341316 ANTXR1Q9H6X2 564 aa25.15■■□□□ 1.62
SPG7-202ENST00000341316 MEIS3Q99687 375 aa25.13■■□□□ 1.61
SPG7-202ENST00000341316 DCTPP1Q9H773 170 aa25.13■■□□□ 1.61
SPG7-202ENST00000341316 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
SPG7-202ENST00000341316 GNAT3A8MTJ3 354 aa25.11■■□□□ 1.61
SPG7-202ENST00000341316 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
SPG7-202ENST00000341316 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
SPG7-202ENST00000341316 LRRC37A3O60309 1634 aa25.11■■□□□ 1.61
SPG7-202ENST00000341316 HTATSF1O43719 755 aaKnown RBP25.11■■□□□ 1.61
SPG7-202ENST00000341316 CEP85Q6P2H3 762 aa25.11■■□□□ 1.61
SPG7-202ENST00000341316 ANO8Q9HCE9 1232 aaPredicted RBP25.11■■□□□ 1.61
SPG7-202ENST00000341316 F6X3S4 739 aa25.1■■□□□ 1.61
SPG7-202ENST00000341316 IL17REQ8NFR9 667 aa25.1■■□□□ 1.61
SPG7-202ENST00000341316 ZNF142P52746 1687 aaPredicted RBP25.1■■□□□ 1.61
SPG7-202ENST00000341316 RBM25P49756 843 aaKnown RBP25.07■■□□□ 1.6
SPG7-202ENST00000341316 ESCO1Q5FWF5 840 aa25.07■■□□□ 1.6
SPG7-202ENST00000341316 PLEKHM2Q8IWE5 1019 aa25.07■■□□□ 1.6
SPG7-202ENST00000341316 RPAP2Q8IXW5 612 aaPredicted RBP25.07■■□□□ 1.6
SPG7-202ENST00000341316 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
SPG7-202ENST00000341316 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
SPG7-202ENST00000341316 SPRYD3Q8NCJ5 442 aa25.07■■□□□ 1.6
SPG7-202ENST00000341316 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
SPG7-202ENST00000341316 GSPT1P15170 499 aaKnown RBP25.06■■□□□ 1.6
SPG7-202ENST00000341316 TBC1D9Q6ZT07 1266 aa25.06■■□□□ 1.6
SPG7-202ENST00000341316 SLC4A10Q6U841 1118 aa25.06■■□□□ 1.6
SPG7-202ENST00000341316 NFAT5O94916 1531 aa25.05■■□□□ 1.6
SPG7-202ENST00000341316 LTN1O94822 1766 aa25.05■■□□□ 1.6
SPG7-202ENST00000341316 PSME1Q06323 249 aa25.05■■□□□ 1.6
SPG7-202ENST00000341316 IP6K1Q92551 441 aa25.05■■□□□ 1.6
SPG7-202ENST00000341316 OTUD7AQ8TE49 926 aaPredicted RBP25.03■■□□□ 1.6
SPG7-202ENST00000341316 NECTIN2Q92692 538 aa25.03■■□□□ 1.6
SPG7-202ENST00000341316 ADAMTSL3P82987 1691 aa25.03■■□□□ 1.6
SPG7-202ENST00000341316 NBPF6Q5VWK0 638 aa25.03■■□□□ 1.6
SPG7-202ENST00000341316 NBPF4Q96M43 638 aa25.03■■□□□ 1.6
SPG7-202ENST00000341316 TAF7Q15545 349 aaPredicted RBP25.01■■□□□ 1.59
SPG7-202ENST00000341316 STK31Q9BXU1 1019 aa25.01■■□□□ 1.59
SPG7-202ENST00000341316 SMARCA5O60264 1052 aaPredicted RBP25.01■■□□□ 1.59
SPG7-202ENST00000341316 KIF2CQ99661 725 aa25.01■■□□□ 1.59
SPG7-202ENST00000341316 CCT4P50991 539 aaKnown RBP25■■□□□ 1.59
SPG7-202ENST00000341316 ORAI2Q96SN7 254 aa25■■□□□ 1.59
SPG7-202ENST00000341316 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
SPG7-202ENST00000341316 APBB1O00213 710 aa25■■□□□ 1.59
SPG7-202ENST00000341316 FLIIQ13045 1269 aa25■■□□□ 1.59
SPG7-202ENST00000341316 NPHP4O75161 1426 aaPredicted RBP24.99■■□□□ 1.59
SPG7-202ENST00000341316 PLEKHG5O94827 1062 aa24.99■■□□□ 1.59
SPG7-202ENST00000341316 CCDC30Q5VVM6 783 aa24.99■■□□□ 1.59
SPG7-202ENST00000341316 FAM208AQ9UK61 1670 aaKnown RBP24.99■■□□□ 1.59
SPG7-202ENST00000341316 XPCQ01831 940 aaPredicted RBP24.98■■□□□ 1.59
SPG7-202ENST00000341316 TTC22Q5TAA0 569 aa24.98■■□□□ 1.59
SPG7-202ENST00000341316 CDC45O75419 566 aa24.97■■□□□ 1.59
SPG7-202ENST00000341316 SETD1BQ9UPS6 1966 aaKnown RBP24.96■■□□□ 1.59
SPG7-202ENST00000341316 FKBP5Q13451 457 aaPredicted RBP24.96■■□□□ 1.59
SPG7-202ENST00000341316 LRRC59Q96AG4 307 aaKnown RBP24.96■■□□□ 1.59
SPG7-202ENST00000341316 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
SPG7-202ENST00000341316 HSCBQ8IWL3 235 aa24.95■■□□□ 1.58
SPG7-202ENST00000341316 KCNH5Q8NCM2 988 aa24.95■■□□□ 1.58
SPG7-202ENST00000341316 LGR6Q9HBX8 967 aa24.95■■□□□ 1.58
SPG7-202ENST00000341316 CEMIPQ8WUJ3 1361 aa24.95■■□□□ 1.58
SPG7-202ENST00000341316 SNX21Q969T3 373 aa24.93■■□□□ 1.58
SPG7-202ENST00000341316 GNAI2P04899 355 aa24.92■■□□□ 1.58
SPG7-202ENST00000341316 RGPD2P0DJD1 1756 aa24.92■■□□□ 1.58
SPG7-202ENST00000341316 GCP02774 474 aa24.91■■□□□ 1.58
SPG7-202ENST00000341316 SOS1Q07889 1333 aaPredicted RBP24.91■■□□□ 1.58
SPG7-202ENST00000341316 HMMRO75330 724 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms