RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
PARVB-201ENST00000338758 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
PARVB-201ENST00000338758 ATP10AO60312 1499 aa17.1■□□□□ 0.33
PARVB-201ENST00000338758 CFAP43Q8NDM7 1665 aa17.1■□□□□ 0.33
PARVB-201ENST00000338758 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
PARVB-201ENST00000338758 NUCB2P80303 420 aa17.09■□□□□ 0.33
PARVB-201ENST00000338758 SAFBQ15424 915 aaKnown RBP eCLIP17.09■□□□□ 0.33
PARVB-201ENST00000338758 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
PARVB-201ENST00000338758 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
PARVB-201ENST00000338758 FLIIQ13045 1269 aa17.09■□□□□ 0.33
PARVB-201ENST00000338758 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
PARVB-201ENST00000338758 BECN2A8MW95 431 aa17.08■□□□□ 0.33
PARVB-201ENST00000338758 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.33
PARVB-201ENST00000338758 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.33
PARVB-201ENST00000338758 PZPP20742 1482 aa17.08■□□□□ 0.32
PARVB-201ENST00000338758 KDM4AO75164 1064 aa17.08■□□□□ 0.32
PARVB-201ENST00000338758 ANXA1P04083 346 aa17.08■□□□□ 0.32
PARVB-201ENST00000338758 SKOR2Q2VWA4 1001 aaPredicted RBP17.08■□□□□ 0.32
PARVB-201ENST00000338758 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
PARVB-201ENST00000338758 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
PARVB-201ENST00000338758 ZPR1O75312 459 aa17.07■□□□□ 0.32
PARVB-201ENST00000338758 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 NKTRP30414 1462 aaKnown RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 TRIM27P14373 513 aa17.07■□□□□ 0.32
PARVB-201ENST00000338758 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
PARVB-201ENST00000338758 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
PARVB-201ENST00000338758 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
PARVB-201ENST00000338758 TCEAL9Q9UHQ7 104 aa17.06■□□□□ 0.32
PARVB-201ENST00000338758 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
PARVB-201ENST00000338758 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
PARVB-201ENST00000338758 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
PARVB-201ENST00000338758 STK11IPQ8N1F8 1099 aa17.06■□□□□ 0.32
PARVB-201ENST00000338758 GPTP24298 496 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
PARVB-201ENST00000338758 A0A087WZG4 1122 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 GOLGA6L19H0YKK7 550 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 IKQ13123 557 aaPredicted RBP17.05■□□□□ 0.32
PARVB-201ENST00000338758 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
PARVB-201ENST00000338758 GCP02774 474 aa17.05■□□□□ 0.32
PARVB-201ENST00000338758 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
PARVB-201ENST00000338758 RABEP1Q15276 862 aa17.04■□□□□ 0.32
PARVB-201ENST00000338758 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
PARVB-201ENST00000338758 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
PARVB-201ENST00000338758 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
PARVB-201ENST00000338758 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
PARVB-201ENST00000338758 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
PARVB-201ENST00000338758 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
PARVB-201ENST00000338758 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
PARVB-201ENST00000338758 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
PARVB-201ENST00000338758 SAMD9Q5K651 1589 aa17.02■□□□□ 0.32
PARVB-201ENST00000338758 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
PARVB-201ENST00000338758 ATP2B1P20020 1258 aa17.02■□□□□ 0.32
PARVB-201ENST00000338758 BACH2Q9BYV9 841 aa17.02■□□□□ 0.32
PARVB-201ENST00000338758 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.32
PARVB-201ENST00000338758 NPATQ14207 1427 aa17.02■□□□□ 0.32
PARVB-201ENST00000338758 SLC39A6Q13433 755 aa17.02■□□□□ 0.31
PARVB-201ENST00000338758 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.31
PARVB-201ENST00000338758 RAI14Q9P0K7 980 aa17.02■□□□□ 0.31
PARVB-201ENST00000338758 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
PARVB-201ENST00000338758 A0A1W2PP64 1363 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 IFIT5Q13325 482 aaKnown RBP17.01■□□□□ 0.31
PARVB-201ENST00000338758 ADGRL2O95490 1459 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 ORAI2Q96SN7 254 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 CYP46A1Q9Y6A2 500 aa17.01■□□□□ 0.31
PARVB-201ENST00000338758 MCM2P49736 904 aa17■□□□□ 0.31
PARVB-201ENST00000338758 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
PARVB-201ENST00000338758 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
PARVB-201ENST00000338758 SKAP1Q86WV1 359 aa17■□□□□ 0.31
PARVB-201ENST00000338758 XBP1P17861 261 aa17■□□□□ 0.31
PARVB-201ENST00000338758 HMGB2P26583 209 aaKnown RBP17■□□□□ 0.31
PARVB-201ENST00000338758 TEX13AQ9BXU3 409 aaPredicted RBP17■□□□□ 0.31
PARVB-201ENST00000338758 IL16Q14005 1332 aa17■□□□□ 0.31
PARVB-201ENST00000338758 ATP2B2Q01814 1243 aa17■□□□□ 0.31
PARVB-201ENST00000338758 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 PTPRCP08575 1304 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
PARVB-201ENST00000338758 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 FLT4P35916 1363 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 MAP3K19Q56UN5 1328 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 MX1P20591 662 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 GLRX3O76003 335 aaKnown RBP16.99■□□□□ 0.31
PARVB-201ENST00000338758 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 NEO1Q92859 1461 aa16.99■□□□□ 0.31
PARVB-201ENST00000338758 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 EYA1Q99502 592 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
PARVB-201ENST00000338758 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
PARVB-201ENST00000338758 CCDC8Q9H0W5 538 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms