RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 USP21Q9UK80 565 aa11.53□□□□□ -0.56
TREM1-202ENST00000334475 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
TREM1-202ENST00000334475 IL13P35225 146 aa11.52□□□□□ -0.57
TREM1-202ENST00000334475 LMOD3Q0VAK6 560 aa11.52□□□□□ -0.57
TREM1-202ENST00000334475 ACEP12821 1306 aa11.52□□□□□ -0.57
TREM1-202ENST00000334475 PXDNQ92626 1479 aa11.51□□□□□ -0.57
TREM1-202ENST00000334475 RIPK4P57078 832 aa11.51□□□□□ -0.57
TREM1-202ENST00000334475 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
TREM1-202ENST00000334475 NFE2L2Q16236 605 aa11.51□□□□□ -0.57
TREM1-202ENST00000334475 GLI3P10071 1580 aa11.5□□□□□ -0.57
TREM1-202ENST00000334475 PEAK1Q9H792 1746 aa11.5□□□□□ -0.57
TREM1-202ENST00000334475 PRKAR2BP31323 418 aa11.5□□□□□ -0.57
TREM1-202ENST00000334475 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
TREM1-202ENST00000334475 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
TREM1-202ENST00000334475 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
TREM1-202ENST00000334475 PIK3C2AO00443 1686 aa11.49□□□□□ -0.57
TREM1-202ENST00000334475 ANP32AP39687 249 aaKnown RBP11.49□□□□□ -0.57
TREM1-202ENST00000334475 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
TREM1-202ENST00000334475 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
TREM1-202ENST00000334475 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
TREM1-202ENST00000334475 EMILIN1Q9Y6C2 1016 aa11.49□□□□□ -0.57
TREM1-202ENST00000334475 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
TREM1-202ENST00000334475 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
TREM1-202ENST00000334475 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
TREM1-202ENST00000334475 TRPC5Q9UL62 973 aaPredicted RBP11.48□□□□□ -0.57
TREM1-202ENST00000334475 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
TREM1-202ENST00000334475 BRWD3Q6RI45 1802 aa11.48□□□□□ -0.57
TREM1-202ENST00000334475 PDE4AP27815 886 aa11.47□□□□□ -0.57
TREM1-202ENST00000334475 GNAI1P63096 354 aa11.47□□□□□ -0.57
TREM1-202ENST00000334475 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
TREM1-202ENST00000334475 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
TREM1-202ENST00000334475 ANP32EQ9BTT0 268 aa11.47□□□□□ -0.57
TREM1-202ENST00000334475 SBNO1A3KN83 1393 aa11.46□□□□□ -0.57
TREM1-202ENST00000334475 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
TREM1-202ENST00000334475 NUTM2FA1L443 756 aa11.46□□□□□ -0.57
TREM1-202ENST00000334475 PPM1GO15355 546 aaPredicted RBP11.46□□□□□ -0.57
TREM1-202ENST00000334475 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
TREM1-202ENST00000334475 FLT4P35916 1363 aa11.45□□□□□ -0.58
TREM1-202ENST00000334475 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
TREM1-202ENST00000334475 FOXO3O43524 673 aa11.45□□□□□ -0.58
TREM1-202ENST00000334475 MVPQ14764 893 aaKnown RBP11.45□□□□□ -0.58
TREM1-202ENST00000334475 FRAT1Q92837 279 aaPredicted RBP11.45□□□□□ -0.58
TREM1-202ENST00000334475 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
TREM1-202ENST00000334475 COG6Q9Y2V7 657 aa11.45□□□□□ -0.58
TREM1-202ENST00000334475 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
TREM1-202ENST00000334475 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 ERICH6Q7L0X2 663 aa11.44□□□□□ -0.58
TREM1-202ENST00000334475 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
TREM1-202ENST00000334475 TSR2Q969E8 191 aaKnown RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
TREM1-202ENST00000334475 PHRF1Q9P1Y6 1649 aaKnown RBP11.44□□□□□ -0.58
TREM1-202ENST00000334475 SLIT2O94813 1529 aa11.44□□□□□ -0.58
TREM1-202ENST00000334475 HMOX1P09601 288 aa11.43□□□□□ -0.58
TREM1-202ENST00000334475 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
TREM1-202ENST00000334475 RRS1Q15050 365 aaKnown RBP11.43□□□□□ -0.58
TREM1-202ENST00000334475 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
TREM1-202ENST00000334475 FTSJ3Q8IY81 847 aaKnown RBP11.43□□□□□ -0.58
TREM1-202ENST00000334475 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
TREM1-202ENST00000334475 DDX19BQ9UMR2 479 aa11.43□□□□□ -0.58
TREM1-202ENST00000334475 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
TREM1-202ENST00000334475 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
TREM1-202ENST00000334475 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 ATF7IPQ6VMQ6 1270 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 SSH1Q8WYL5 1049 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 ARHGAP45Q92619 1136 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
TREM1-202ENST00000334475 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
TREM1-202ENST00000334475 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
TREM1-202ENST00000334475 KDRP35968 1356 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 LTN1O94822 1766 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 KIF1AQ12756 1690 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 FBLN1P23142 703 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 RWDD1Q9H446 243 aaPredicted RBP11.41□□□□□ -0.58
TREM1-202ENST00000334475 LRRC37A3O60309 1634 aa11.41□□□□□ -0.58
TREM1-202ENST00000334475 RLBP1P12271 317 aa11.4□□□□□ -0.58
TREM1-202ENST00000334475 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
TREM1-202ENST00000334475 SPATA31A3Q5VYP0 1347 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 TRIM27P14373 513 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 UNC5CLQ8IV45 518 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 BCL2L13Q9BXK5 485 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
TREM1-202ENST00000334475 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 VAMP4O75379 141 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 IGHDP01880 384 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 EVX2Q03828 476 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 SULT6B1Q6IMI4 303 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
TREM1-202ENST00000334475 NPHP3Q7Z494 1330 aa11.37□□□□□ -0.59
TREM1-202ENST00000334475 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms