RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 FBLN1P23142 703 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
PRAMEF1-201ENST00000332296 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
PRAMEF1-201ENST00000332296 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
PRAMEF1-201ENST00000332296 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
PRAMEF1-201ENST00000332296 IL16Q14005 1332 aa12.72□□□□□ -0.37
PRAMEF1-201ENST00000332296 MST1RQ04912 1400 aa12.72□□□□□ -0.37
PRAMEF1-201ENST00000332296 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
PRAMEF1-201ENST00000332296 ZMYND15Q9H091 742 aa12.71□□□□□ -0.37
PRAMEF1-201ENST00000332296 DDX19BQ9UMR2 479 aa12.71□□□□□ -0.37
PRAMEF1-201ENST00000332296 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
PRAMEF1-201ENST00000332296 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
PRAMEF1-201ENST00000332296 USP6P35125 1406 aa12.7□□□□□ -0.38
PRAMEF1-201ENST00000332296 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
PRAMEF1-201ENST00000332296 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 FOXO3O43524 673 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 NME9Q86XW9 330 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 C1orf115Q9H7X2 142 aa12.69□□□□□ -0.38
PRAMEF1-201ENST00000332296 KIF16BQ96L93 1317 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 PSME1Q06323 249 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 SLAIN2Q9P270 581 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
PRAMEF1-201ENST00000332296 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
PRAMEF1-201ENST00000332296 HMOX1P09601 288 aa12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 FCHSD2O94868 740 aa12.66□□□□□ -0.38
PRAMEF1-201ENST00000332296 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
PRAMEF1-201ENST00000332296 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
PRAMEF1-201ENST00000332296 BRINP3Q76B58 766 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 NUCB1Q02818 461 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
PRAMEF1-201ENST00000332296 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 COG3Q96JB2 828 aa12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
PRAMEF1-201ENST00000332296 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
PRAMEF1-201ENST00000332296 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
PRAMEF1-201ENST00000332296 VAMP4O75379 141 aa12.62□□□□□ -0.39
PRAMEF1-201ENST00000332296 MRPL50Q8N5N7 158 aaKnown RBP12.62□□□□□ -0.39
PRAMEF1-201ENST00000332296 NLRP6P59044 892 aa12.61□□□□□ -0.39
PRAMEF1-201ENST00000332296 CHD1LQ86WJ1 897 aa12.61□□□□□ -0.39
PRAMEF1-201ENST00000332296 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
PRAMEF1-201ENST00000332296 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 SOX12O15370 315 aa12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 IL13P35225 146 aa12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
PRAMEF1-201ENST00000332296 OVOS2A0A0J9YW53 1432 aa12.59□□□□□ -0.39
PRAMEF1-201ENST00000332296 OVOS2Q6IE36 1432 aa12.59□□□□□ -0.39
PRAMEF1-201ENST00000332296 ROBO1Q9Y6N7 1651 aa12.59□□□□□ -0.39
PRAMEF1-201ENST00000332296 MCM4P33991 863 aa12.59□□□□□ -0.39
PRAMEF1-201ENST00000332296 ABCC4O15439 1325 aa12.58□□□□□ -0.39
PRAMEF1-201ENST00000332296 PXDNQ92626 1479 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 RRS1Q15050 365 aaKnown RBP12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 SIRT2Q8IXJ6 389 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 CHMP5Q9NZZ3 219 aa12.58□□□□□ -0.4
PRAMEF1-201ENST00000332296 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 TOM1O60784 492 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 GNAI1P63096 354 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 NHSL1Q5SYE7 1610 aa12.57□□□□□ -0.4
PRAMEF1-201ENST00000332296 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
PRAMEF1-201ENST00000332296 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms