RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 ORAI2Q96SN7 254 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
SS18L1-201ENST00000331758 UNC13BO14795 1591 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
SS18L1-201ENST00000331758 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 BRPF3Q9ULD4 1205 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 BCORL1Q5H9F3 1711 aa11.6□□□□□ -0.55
SS18L1-201ENST00000331758 C19orf44Q9H6X5 657 aa11.59□□□□□ -0.55
SS18L1-201ENST00000331758 GCP02774 474 aa11.59□□□□□ -0.55
SS18L1-201ENST00000331758 BLMP54132 1417 aaPredicted RBP11.59□□□□□ -0.55
SS18L1-201ENST00000331758 KIF1BO60333 1816 aa11.59□□□□□ -0.55
SS18L1-201ENST00000331758 CNTROBQ8N137 903 aa11.58□□□□□ -0.55
SS18L1-201ENST00000331758 DDX49Q9Y6V7 483 aaKnown RBP11.58□□□□□ -0.55
SS18L1-201ENST00000331758 KDM5AP29375 1690 aaKnown RBP11.58□□□□□ -0.56
SS18L1-201ENST00000331758 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
SS18L1-201ENST00000331758 NEK4P51957 841 aa11.58□□□□□ -0.56
SS18L1-201ENST00000331758 MRPL50Q8N5N7 158 aaKnown RBP11.58□□□□□ -0.56
SS18L1-201ENST00000331758 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
SS18L1-201ENST00000331758 LRRFIP2Q9Y608 721 aaKnown RBP11.58□□□□□ -0.56
SS18L1-201ENST00000331758 GOLGA6L3A6NEY3 463 aa11.58□□□□□ -0.56
SS18L1-201ENST00000331758 MEIS3Q99687 375 aa11.58□□□□□ -0.56
SS18L1-201ENST00000331758 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 PTMSP20962 102 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 HOXC9P31274 260 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 ZMYM4Q5VZL5 1548 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 GSE1Q14687 1217 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
SS18L1-201ENST00000331758 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 PTPRCP08575 1304 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 PI4KAP2A4QPH2 592 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 PI4KAP1Q8N8J0 262 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
SS18L1-201ENST00000331758 SHROOM2Q13796 1616 aa11.57□□□□□ -0.56
SS18L1-201ENST00000331758 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
SS18L1-201ENST00000331758 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
SS18L1-201ENST00000331758 ADAMTS2O95450 1211 aa11.56□□□□□ -0.56
SS18L1-201ENST00000331758 APPP05067 770 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
SS18L1-201ENST00000331758 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
SS18L1-201ENST00000331758 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 MSH6P52701 1360 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
SS18L1-201ENST00000331758 AACSQ86V21 672 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
SS18L1-201ENST00000331758 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
SS18L1-201ENST00000331758 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 HDAC1Q13547 482 aaPredicted RBP11.54□□□□□ -0.56
SS18L1-201ENST00000331758 WASHC4Q2M389 1173 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 LRRFIP1Q32MZ4 808 aaKnown RBP11.54□□□□□ -0.56
SS18L1-201ENST00000331758 MYD88Q99836 296 aa11.54□□□□□ -0.56
SS18L1-201ENST00000331758 LARP1Q6PKG0 1096 aaKnown RBP11.53□□□□□ -0.56
SS18L1-201ENST00000331758 IP6K1Q92551 441 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 CHPF2Q9P2E5 772 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 INSRP06213 1382 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 RABEP1Q15276 862 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
SS18L1-201ENST00000331758 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
SS18L1-201ENST00000331758 E9PCH4 1651 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 PRR36Q9H6K5 1346 aa11.53□□□□□ -0.56
SS18L1-201ENST00000331758 MX1P20591 662 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 MAP3K4Q9Y6R4 1608 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 TSHZ3Q63HK5 1081 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 KIF1BPQ96EK5 621 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.56
SS18L1-201ENST00000331758 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.57
SS18L1-201ENST00000331758 SYNMO15061 1565 aa11.52□□□□□ -0.57
SS18L1-201ENST00000331758 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
SS18L1-201ENST00000331758 H3BQV1 296 aa11.52□□□□□ -0.57
SS18L1-201ENST00000331758 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
SS18L1-201ENST00000331758 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.57
SS18L1-201ENST00000331758 VPS37CA5D8V6 355 aaPredicted RBP11.51□□□□□ -0.57
SS18L1-201ENST00000331758 AKAP4Q5JQC9 854 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 FMNL2Q96PY5 1086 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 NUCB2P80303 420 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
SS18L1-201ENST00000331758 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
SS18L1-201ENST00000331758 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
SS18L1-201ENST00000331758 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
SS18L1-201ENST00000331758 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
SS18L1-201ENST00000331758 MCTP1Q6DN14 999 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms