RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
CPNE7-202ENST00000319518 C8orf58Q8NAV2 365 aa25.92■■□□□ 1.74
CPNE7-202ENST00000319518 DLG5Q8TDM6 1919 aa25.92■■□□□ 1.74
CPNE7-202ENST00000319518 CD2BP2O95400 341 aaKnown RBP25.91■■□□□ 1.74
CPNE7-202ENST00000319518 RRAGDQ9NQL2 400 aaPredicted RBP25.9■■□□□ 1.74
CPNE7-202ENST00000319518 USP31Q70CQ4 1352 aa25.9■■□□□ 1.74
CPNE7-202ENST00000319518 GOLGA6L3A6NEY3 463 aa25.9■■□□□ 1.74
CPNE7-202ENST00000319518 CALD1Q05682 793 aaKnown RBP25.9■■□□□ 1.74
CPNE7-202ENST00000319518 TWISTNBQ3B726 338 aaPredicted RBP25.9■■□□□ 1.74
CPNE7-202ENST00000319518 MAP3K19Q56UN5 1328 aa25.9■■□□□ 1.74
CPNE7-202ENST00000319518 NALCNQ8IZF0 1738 aa25.9■■□□□ 1.74
CPNE7-202ENST00000319518 TBC1D9Q6ZT07 1266 aa25.89■■□□□ 1.74
CPNE7-202ENST00000319518 ANKLE2Q86XL3 938 aa25.89■■□□□ 1.74
CPNE7-202ENST00000319518 PANK2Q9BZ23 570 aa25.89■■□□□ 1.74
CPNE7-202ENST00000319518 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
CPNE7-202ENST00000319518 TTC21AQ8NDW8 1320 aa25.88■■□□□ 1.73
CPNE7-202ENST00000319518 TNPO1Q92973 898 aaKnown RBP25.85■■□□□ 1.73
CPNE7-202ENST00000319518 NLRP6P59044 892 aa25.85■■□□□ 1.73
CPNE7-202ENST00000319518 CHMP4BQ9H444 224 aaKnown RBP25.85■■□□□ 1.73
CPNE7-202ENST00000319518 PIK3C2AO00443 1686 aa25.85■■□□□ 1.73
CPNE7-202ENST00000319518 RBM42Q9BTD8 480 aaKnown RBP25.84■■□□□ 1.73
CPNE7-202ENST00000319518 DDX11L8A8MPP1 907 aa25.83■■□□□ 1.73
CPNE7-202ENST00000319518 GSPT1P15170 499 aaKnown RBP25.82■■□□□ 1.72
CPNE7-202ENST00000319518 HSP90AB1P08238 724 aaKnown RBP25.82■■□□□ 1.72
CPNE7-202ENST00000319518 MCM10Q7L590 875 aa25.82■■□□□ 1.72
CPNE7-202ENST00000319518 FMN2Q9NZ56 1722 aa25.81■■□□□ 1.72
CPNE7-202ENST00000319518 LMOD3Q0VAK6 560 aa25.81■■□□□ 1.72
CPNE7-202ENST00000319518 RAB3GAP1Q15042 981 aa25.81■■□□□ 1.72
CPNE7-202ENST00000319518 ADAMTSL3P82987 1691 aa25.81■■□□□ 1.72
CPNE7-202ENST00000319518 ANKARQ7Z5J8 1434 aa25.8■■□□□ 1.72
CPNE7-202ENST00000319518 AMPHP49418 695 aa25.8■■□□□ 1.72
CPNE7-202ENST00000319518 CIZ1Q9ULV3 898 aaPredicted RBP25.8■■□□□ 1.72
CPNE7-202ENST00000319518 API5Q9BZZ5 524 aaKnown RBP25.79■■□□□ 1.72
CPNE7-202ENST00000319518 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
CPNE7-202ENST00000319518 C14orf37Q86TY3 774 aa25.79■■□□□ 1.72
CPNE7-202ENST00000319518 FOXD4L1Q9NU39 408 aa25.78■■□□□ 1.72
CPNE7-202ENST00000319518 RGPD1P0DJD0 1748 aa25.78■■□□□ 1.72
CPNE7-202ENST00000319518 FOXO3O43524 673 aa25.78■■□□□ 1.72
CPNE7-202ENST00000319518 PLEKHM2Q8IWE5 1019 aa25.78■■□□□ 1.72
CPNE7-202ENST00000319518 ABTB2Q8N961 1025 aa25.78■■□□□ 1.72
CPNE7-202ENST00000319518 ZNF142P52746 1687 aaPredicted RBP25.77■■□□□ 1.72
CPNE7-202ENST00000319518 KRT24Q2M2I5 525 aa25.77■■□□□ 1.72
CPNE7-202ENST00000319518 SBNO1A3KN83 1393 aa25.77■■□□□ 1.72
CPNE7-202ENST00000319518 FLT4P35916 1363 aa25.77■■□□□ 1.72
CPNE7-202ENST00000319518 RGS12O14924 1447 aa25.77■■□□□ 1.72
CPNE7-202ENST00000319518 K7ELQ4 463 aaPredicted RBP25.76■■□□□ 1.71
CPNE7-202ENST00000319518 DCTPP1Q9H773 170 aa25.76■■□□□ 1.71
CPNE7-202ENST00000319518 CDC45O75419 566 aa25.75■■□□□ 1.71
CPNE7-202ENST00000319518 EYA1Q99502 592 aa25.75■■□□□ 1.71
CPNE7-202ENST00000319518 PHF8Q9UPP1 1060 aa25.75■■□□□ 1.71
CPNE7-202ENST00000319518 KIF24Q5T7B8 1368 aa25.75■■□□□ 1.71
CPNE7-202ENST00000319518 ATP10DQ9P241 1426 aa25.75■■□□□ 1.71
CPNE7-202ENST00000319518 MRE11P49959 708 aa25.74■■□□□ 1.71
CPNE7-202ENST00000319518 C16orf71Q8IYS4 520 aaPredicted RBP25.74■■□□□ 1.71
CPNE7-202ENST00000319518 GAS2L2Q8NHY3 880 aa25.74■■□□□ 1.71
CPNE7-202ENST00000319518 INTS3Q68E01 1043 aaKnown RBP25.74■■□□□ 1.71
CPNE7-202ENST00000319518 MTHFSDQ2M296 383 aaKnown RBP25.73■■□□□ 1.71
CPNE7-202ENST00000319518 GRPEL1Q9HAV7 217 aa25.73■■□□□ 1.71
CPNE7-202ENST00000319518 MARF1Q9Y4F3 1742 aaKnown RBP25.72■■□□□ 1.71
CPNE7-202ENST00000319518 LTV1Q96GA3 475 aaPredicted RBP25.72■■□□□ 1.71
CPNE7-202ENST00000319518 ARHGEF10O15013 1369 aa25.72■■□□□ 1.71
CPNE7-202ENST00000319518 ESCO1Q5FWF5 840 aa25.71■■□□□ 1.71
CPNE7-202ENST00000319518 GAS2L3Q86XJ1 694 aa25.71■■□□□ 1.71
CPNE7-202ENST00000319518 OTUD7AQ8TE49 926 aaPredicted RBP25.71■■□□□ 1.71
CPNE7-202ENST00000319518 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
CPNE7-202ENST00000319518 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
CPNE7-202ENST00000319518 PLEKHG5O94827 1062 aa25.7■■□□□ 1.7
CPNE7-202ENST00000319518 TTC22Q5TAA0 569 aa25.7■■□□□ 1.7
CPNE7-202ENST00000319518 HOXC9P31274 260 aa25.69■■□□□ 1.7
CPNE7-202ENST00000319518 GBP4Q96PP9 640 aa25.69■■□□□ 1.7
CPNE7-202ENST00000319518 ANKRD44Q8N8A2 993 aa25.69■■□□□ 1.7
CPNE7-202ENST00000319518 NPHP4O75161 1426 aaPredicted RBP25.69■■□□□ 1.7
CPNE7-202ENST00000319518 HSP90AA1P07900 732 aaKnown RBP25.68■■□□□ 1.7
CPNE7-202ENST00000319518 SSFA2P28290 1259 aa25.68■■□□□ 1.7
CPNE7-202ENST00000319518 CHL1O00533 1208 aa25.68■■□□□ 1.7
CPNE7-202ENST00000319518 IGSF1Q8N6C5 1336 aa25.68■■□□□ 1.7
CPNE7-202ENST00000319518 CEP85Q6P2H3 762 aa25.67■■□□□ 1.7
CPNE7-202ENST00000319518 XPCQ01831 940 aaPredicted RBP25.66■■□□□ 1.7
CPNE7-202ENST00000319518 MSH6P52701 1360 aa25.66■■□□□ 1.7
CPNE7-202ENST00000319518 EIF5BO60841 1220 aaKnown RBP25.65■■□□□ 1.7
CPNE7-202ENST00000319518 KDRP35968 1356 aa25.65■■□□□ 1.7
CPNE7-202ENST00000319518 ADGRL3Q9HAR2 1447 aa25.65■■□□□ 1.7
CPNE7-202ENST00000319518 RTL1A6NKG5 1358 aa25.64■■□□□ 1.7
CPNE7-202ENST00000319518 PSME1Q06323 249 aa25.64■■□□□ 1.7
CPNE7-202ENST00000319518 USHBP1Q8N6Y0 703 aa25.64■■□□□ 1.7
CPNE7-202ENST00000319518 ORAI2Q96SN7 254 aa25.64■■□□□ 1.7
CPNE7-202ENST00000319518 USP26Q9BXU7 913 aa25.64■■□□□ 1.7
CPNE7-202ENST00000319518 ISY1Q9ULR0 285 aaKnown RBP25.64■■□□□ 1.7
CPNE7-202ENST00000319518 CRB1P82279 1406 aa25.64■■□□□ 1.69
CPNE7-202ENST00000319518 ZBTB7CA1YPR0 619 aa25.64■■□□□ 1.69
CPNE7-202ENST00000319518 SMARCA5O60264 1052 aaPredicted RBP25.63■■□□□ 1.69
CPNE7-202ENST00000319518 MEIS3Q99687 375 aa25.63■■□□□ 1.69
CPNE7-202ENST00000319518 CLEC17AQ6ZS10 378 aa25.63■■□□□ 1.69
CPNE7-202ENST00000319518 KIAA0232Q92628 1395 aa25.62■■□□□ 1.69
CPNE7-202ENST00000319518 RPAP2Q8IXW5 612 aaPredicted RBP25.62■■□□□ 1.69
CPNE7-202ENST00000319518 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
CPNE7-202ENST00000319518 SDSP20132 328 aa25.61■■□□□ 1.69
CPNE7-202ENST00000319518 RABEP1Q15276 862 aa25.61■■□□□ 1.69
CPNE7-202ENST00000319518 SKOR2Q2VWA4 1001 aaPredicted RBP25.61■■□□□ 1.69
CPNE7-202ENST00000319518 CLCN1P35523 988 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms