RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 LNPKQ9C0E8 428 aa24.48■■□□□ 1.51
AP3S1-201ENST00000316788 ADGRL3Q9HAR2 1447 aa24.48■■□□□ 1.51
AP3S1-201ENST00000316788 ARHGEF10O15013 1369 aa24.47■■□□□ 1.51
AP3S1-201ENST00000316788 NUTM2FA1L443 756 aa24.47■■□□□ 1.51
AP3S1-201ENST00000316788 INTS3Q68E01 1043 aaKnown RBP24.47■■□□□ 1.51
AP3S1-201ENST00000316788 SNX21Q969T3 373 aa24.47■■□□□ 1.51
AP3S1-201ENST00000316788 SLKQ9H2G2 1235 aaPredicted RBP24.47■■□□□ 1.51
AP3S1-201ENST00000316788 CHL1O00533 1208 aa24.46■■□□□ 1.51
AP3S1-201ENST00000316788 PEAK1Q9H792 1746 aa24.45■■□□□ 1.51
AP3S1-201ENST00000316788 NCOA3Q9Y6Q9 1424 aa24.45■■□□□ 1.5
AP3S1-201ENST00000316788 SIRT2Q8IXJ6 389 aa24.44■■□□□ 1.5
AP3S1-201ENST00000316788 SULT6B1Q6IMI4 303 aa24.44■■□□□ 1.5
AP3S1-201ENST00000316788 CHMP5Q9NZZ3 219 aa24.44■■□□□ 1.5
AP3S1-201ENST00000316788 ANKRD45Q5TZF3 282 aa24.43■■□□□ 1.5
AP3S1-201ENST00000316788 C19orf44Q9H6X5 657 aa24.43■■□□□ 1.5
AP3S1-201ENST00000316788 FAM83GA6ND36 823 aa24.42■■□□□ 1.5
AP3S1-201ENST00000316788 HSCBQ8IWL3 235 aa24.42■■□□□ 1.5
AP3S1-201ENST00000316788 PTPRCP08575 1304 aa24.42■■□□□ 1.5
AP3S1-201ENST00000316788 RGS12O14924 1447 aa24.41■■□□□ 1.5
AP3S1-201ENST00000316788 MSH6P52701 1360 aa24.41■■□□□ 1.5
AP3S1-201ENST00000316788 ELL2O00472 640 aaPredicted RBP24.41■■□□□ 1.5
AP3S1-201ENST00000316788 CRB1P82279 1406 aa24.4■■□□□ 1.5
AP3S1-201ENST00000316788 AEBP1Q8IUX7 1158 aa24.4■■□□□ 1.5
AP3S1-201ENST00000316788 SBNO1A3KN83 1393 aa24.39■■□□□ 1.5
AP3S1-201ENST00000316788 KDRP35968 1356 aa24.39■■□□□ 1.49
AP3S1-201ENST00000316788 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
AP3S1-201ENST00000316788 DCTPP1Q9H773 170 aa24.38■■□□□ 1.49
AP3S1-201ENST00000316788 DCTN1Q14203 1278 aa24.38■■□□□ 1.49
AP3S1-201ENST00000316788 FLT4P35916 1363 aa24.37■■□□□ 1.49
AP3S1-201ENST00000316788 RPAP2Q8IXW5 612 aaPredicted RBP24.37■■□□□ 1.49
AP3S1-201ENST00000316788 C1orf115Q9H7X2 142 aa24.37■■□□□ 1.49
AP3S1-201ENST00000316788 ANKARQ7Z5J8 1434 aa24.36■■□□□ 1.49
AP3S1-201ENST00000316788 ATP10DQ9P241 1426 aa24.36■■□□□ 1.49
AP3S1-201ENST00000316788 ANKRD44Q8N8A2 993 aa24.36■■□□□ 1.49
AP3S1-201ENST00000316788 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
AP3S1-201ENST00000316788 ATF3P18847 181 aa24.35■■□□□ 1.49
AP3S1-201ENST00000316788 CIZ1Q9ULV3 898 aaPredicted RBP24.35■■□□□ 1.49
AP3S1-201ENST00000316788 DDIT3P35638 169 aa24.35■■□□□ 1.49
AP3S1-201ENST00000316788 HSP90AB2PQ58FF8 381 aa24.34■■□□□ 1.49
AP3S1-201ENST00000316788 USP54Q70EL1 1684 aa24.33■■□□□ 1.49
AP3S1-201ENST00000316788 CDC45O75419 566 aa24.33■■□□□ 1.49
AP3S1-201ENST00000316788 MCM4P33991 863 aa24.33■■□□□ 1.49
AP3S1-201ENST00000316788 MAP3K19Q56UN5 1328 aa24.32■■□□□ 1.48
AP3S1-201ENST00000316788 DCCP43146 1447 aa24.32■■□□□ 1.48
AP3S1-201ENST00000316788 MST1RQ04912 1400 aa24.32■■□□□ 1.48
AP3S1-201ENST00000316788 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
AP3S1-201ENST00000316788 TBC1D9Q6ZT07 1266 aa24.32■■□□□ 1.48
AP3S1-201ENST00000316788 CADPS2Q86UW7 1296 aa24.32■■□□□ 1.48
AP3S1-201ENST00000316788 IGSF1Q8N6C5 1336 aa24.31■■□□□ 1.48
AP3S1-201ENST00000316788 IL27Q8NEV9 243 aa24.31■■□□□ 1.48
AP3S1-201ENST00000316788 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
AP3S1-201ENST00000316788 RGPD8O14715 1765 aaPredicted RBP24.3■■□□□ 1.48
AP3S1-201ENST00000316788 L1TD1Q5T7N2 865 aaKnown RBP24.3■■□□□ 1.48
AP3S1-201ENST00000316788 ORAI2Q96SN7 254 aa24.3■■□□□ 1.48
AP3S1-201ENST00000316788 KIF2CQ99661 725 aa24.3■■□□□ 1.48
AP3S1-201ENST00000316788 LRRC37A3O60309 1634 aa24.29■■□□□ 1.48
AP3S1-201ENST00000316788 C1orf167Q5SNV9 1468 aa24.29■■□□□ 1.48
AP3S1-201ENST00000316788 SOS1Q07889 1333 aaPredicted RBP24.29■■□□□ 1.48
AP3S1-201ENST00000316788 MCM10Q7L590 875 aa24.29■■□□□ 1.48
AP3S1-201ENST00000316788 PLEKHM2Q8IWE5 1019 aa24.29■■□□□ 1.48
AP3S1-201ENST00000316788 GAS2L2Q8NHY3 880 aa24.29■■□□□ 1.48
AP3S1-201ENST00000316788 CEP85Q6P2H3 762 aa24.27■■□□□ 1.48
AP3S1-201ENST00000316788 SLAIN2Q9P270 581 aa24.27■■□□□ 1.48
AP3S1-201ENST00000316788 PIK3C2AO00443 1686 aa24.27■■□□□ 1.48
AP3S1-201ENST00000316788 DDX11L8A8MPP1 907 aa24.26■■□□□ 1.47
AP3S1-201ENST00000316788 ESCO1Q5FWF5 840 aa24.26■■□□□ 1.47
AP3S1-201ENST00000316788 TTC22Q5TAA0 569 aa24.26■■□□□ 1.47
AP3S1-201ENST00000316788 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
AP3S1-201ENST00000316788 BRPF3Q9ULD4 1205 aa24.26■■□□□ 1.47
AP3S1-201ENST00000316788 UBAP1LF5GYI3 381 aa24.24■■□□□ 1.47
AP3S1-201ENST00000316788 GSPT1P15170 499 aaKnown RBP24.24■■□□□ 1.47
AP3S1-201ENST00000316788 MTHFSDQ2M296 383 aaKnown RBP24.24■■□□□ 1.47
AP3S1-201ENST00000316788 CCT4P50991 539 aaKnown RBP24.24■■□□□ 1.47
AP3S1-201ENST00000316788 KRT24Q2M2I5 525 aa24.24■■□□□ 1.47
AP3S1-201ENST00000316788 BABAM1Q9NWV8 329 aa24.24■■□□□ 1.47
AP3S1-201ENST00000316788 NGDNQ8NEJ9 315 aaKnown RBP24.23■■□□□ 1.47
AP3S1-201ENST00000316788 HMMRO75330 724 aa24.22■■□□□ 1.47
AP3S1-201ENST00000316788 PTMSP20962 102 aa24.22■■□□□ 1.47
AP3S1-201ENST00000316788 DDX17Q92841 729 aaKnown RBP24.22■■□□□ 1.47
AP3S1-201ENST00000316788 HSP90AB1P08238 724 aaKnown RBP24.21■■□□□ 1.47
AP3S1-201ENST00000316788 PIP4K2BP78356 416 aa24.21■■□□□ 1.47
AP3S1-201ENST00000316788 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
AP3S1-201ENST00000316788 TSPYL4Q9UJ04 414 aa24.21■■□□□ 1.47
AP3S1-201ENST00000316788 K7ELQ4 463 aaPredicted RBP24.21■■□□□ 1.47
AP3S1-201ENST00000316788 SPRYD3Q8NCJ5 442 aa24.21■■□□□ 1.47
AP3S1-201ENST00000316788 EYA1Q99502 592 aa24.21■■□□□ 1.47
AP3S1-201ENST00000316788 SLC4A2P04920 1241 aa24.2■■□□□ 1.46
AP3S1-201ENST00000316788 AMPHP49418 695 aa24.2■■□□□ 1.46
AP3S1-201ENST00000316788 TOM1O60784 492 aa24.19■■□□□ 1.46
AP3S1-201ENST00000316788 PHF8Q9UPP1 1060 aa24.19■■□□□ 1.46
AP3S1-201ENST00000316788 MEIS3Q99687 375 aa24.18■■□□□ 1.46
AP3S1-201ENST00000316788 FSD2A1L4K1 749 aa24.18■■□□□ 1.46
AP3S1-201ENST00000316788 RAB3GAP1Q15042 981 aa24.18■■□□□ 1.46
AP3S1-201ENST00000316788 RABEP1Q15276 862 aa24.18■■□□□ 1.46
AP3S1-201ENST00000316788 ISY1Q9ULR0 285 aaKnown RBP24.18■■□□□ 1.46
AP3S1-201ENST00000316788 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
AP3S1-201ENST00000316788 OSBPL3Q9H4L5 887 aa24.17■■□□□ 1.46
AP3S1-201ENST00000316788 FOXO3O43524 673 aa24.16■■□□□ 1.46
AP3S1-201ENST00000316788 TRAK2O60296 914 aa24.16■■□□□ 1.46
AP3S1-201ENST00000316788 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms