RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 BLMP54132 1417 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-201ENST00000314191 APPP05067 770 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ZBTB40Q9NUA8 1239 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 H3BQV1 296 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 IFFO2Q5TF58 517 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ORAI2Q96SN7 254 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 G2E3Q7L622 706 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ERVK-7P63135 1459 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 AACSQ86V21 672 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ANKRD44Q8N8A2 993 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 PI4KAP2A4QPH2 592 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 PI4KAP1Q8N8J0 262 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 JARID2Q92833 1246 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 TBC1D9Q6ZT07 1266 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 UPF3BQ9BZI7 483 aaKnown RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 CWC27Q6UX04 472 aaKnown RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 MYD88Q99836 296 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 KIF3AQ9Y496 699 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 PRDM15P57071 1507 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 CCDC8Q9H0W5 538 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-201ENST00000314191 KDM2BQ8NHM5 1336 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 SLC39A6Q13433 755 aa7.49□□□□□ -1.21
PRKDC-201ENST00000314191 FOSBP53539 338 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 ERC1Q8IUD2 1116 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 TRMT2AQ8IZ69 625 aaKnown RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 TMEM2Q9UHN6 1383 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 CCDC85AQ96PX6 553 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 ISY1Q9ULR0 285 aaKnown RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 PTPRCP08575 1304 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 FLT4P35916 1363 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 CSPP1Q1MSJ5 1256 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 NEO1Q92859 1461 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 HSPA2P54652 639 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 BMP2KLQ5H9B9 411 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 INSRP06213 1382 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 METP08581 1390 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 MLH3Q9UHC1 1453 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 HOXC9P31274 260 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 MCM4P33991 863 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 SMC5Q8IY18 1101 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 DBF4Q9UBU7 674 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 ZNF521Q96K83 1311 aa7.48□□□□□ -1.21
PRKDC-201ENST00000314191 PHAXQ9H814 394 aaKnown RBP7.48□□□□□ -1.21
PRKDC-201ENST00000314191 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
PRKDC-201ENST00000314191 TTC37Q6PGP7 1564 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 PLEKHG3A1L390 1219 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 CHPF2Q9P2E5 772 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 ABCC1P33527 1531 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 KIF1BPQ96EK5 621 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 IFNL2Q8IZJ0 200 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 PLEKHF1Q96S99 279 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 BRPF3Q9ULD4 1205 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 LARP1Q6PKG0 1096 aaKnown RBP7.47□□□□□ -1.21
PRKDC-201ENST00000314191 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
PRKDC-201ENST00000314191 PSMA5P28066 241 aa7.47□□□□□ -1.21
PRKDC-201ENST00000314191 LRRFIP1Q32MZ4 808 aaKnown RBP7.46□□□□□ -1.21
PRKDC-201ENST00000314191 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.21
PRKDC-201ENST00000314191 PPP1R42Q7Z4L9 355 aa7.46□□□□□ -1.21
PRKDC-201ENST00000314191 MAP3K2Q9Y2U5 619 aa7.46□□□□□ -1.21
PRKDC-201ENST00000314191 CYP46A1Q9Y6A2 500 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 ATP5J2-PTCD1G3V325 749 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 IL27Q8NEV9 243 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 STK3Q13188 491 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 SIRT1Q96EB6 747 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 DCTPP1Q9H773 170 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 KDM4AO75164 1064 aa7.46□□□□□ -1.22
PRKDC-201ENST00000314191 EIF2AK4Q9P2K8 1649 aaKnown RBP7.46□□□□□ -1.22
PRKDC-201ENST00000314191 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 CAVIN1Q6NZI2 390 aaKnown RBP7.45□□□□□ -1.22
PRKDC-201ENST00000314191 KIF6Q6ZMV9 814 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 RHPN1Q8TCX5 695 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 TTC22Q5TAA0 569 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 CNNM1Q9NRU3 951 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 BICD2Q8TD16 824 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 LARP6Q9BRS8 491 aaKnown RBP7.45□□□□□ -1.22
PRKDC-201ENST00000314191 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 RAB11FIP3O75154 756 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 MCM2P49736 904 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 GLRX3O76003 335 aaKnown RBP7.45□□□□□ -1.22
PRKDC-201ENST00000314191 BOLA2Q9H3K6 86 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 TULP1O00294 542 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-201ENST00000314191 KIAA2012Q0VF49 1180 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 PDE1AP54750 535 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 ZFYVE9O95405 1425 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 EDC4Q6P2E9 1401 aaKnown RBP7.45□□□□□ -1.22
PRKDC-201ENST00000314191 GOLGA6L6A8MZA4 724 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 MRE11P49959 708 aa7.45□□□□□ -1.22
PRKDC-201ENST00000314191 KDM5DQ9BY66 1539 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 A0A087WZG4 1122 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CPLX1O14810 134 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 PRR36Q9H6K5 1346 aa7.44□□□□□ -1.22
PRKDC-201ENST00000314191 CHL1O00533 1208 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms