RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 CHL1O00533 1208 aa12.39□□□□□ -0.43
SEC16A-204ENST00000313084 ABCC4O15439 1325 aa12.38□□□□□ -0.43
SEC16A-204ENST00000313084 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
SEC16A-204ENST00000313084 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
SEC16A-204ENST00000313084 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
SEC16A-204ENST00000313084 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
SEC16A-204ENST00000313084 GCC1Q96CN9 775 aa12.37□□□□□ -0.43
SEC16A-204ENST00000313084 DLC1Q96QB1 1528 aa12.37□□□□□ -0.43
SEC16A-204ENST00000313084 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
SEC16A-204ENST00000313084 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-204ENST00000313084 HOXC9P31274 260 aa12.36□□□□□ -0.43
SEC16A-204ENST00000313084 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
SEC16A-204ENST00000313084 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
SEC16A-204ENST00000313084 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
SEC16A-204ENST00000313084 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
SEC16A-204ENST00000313084 IL1RAPL2Q9NP60 686 aa12.36□□□□□ -0.43
SEC16A-204ENST00000313084 PLEKHG1Q9ULL1 1385 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
SEC16A-204ENST00000313084 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 RILPL2Q969X0 211 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
SEC16A-204ENST00000313084 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
SEC16A-204ENST00000313084 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 KCNQ3O43525 872 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
SEC16A-204ENST00000313084 ANTXR1Q9H6X2 564 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 FLT4P35916 1363 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 ZC3H6P61129 1189 aaKnown RBP12.34□□□□□ -0.43
SEC16A-204ENST00000313084 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-204ENST00000313084 FLIIQ13045 1269 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
SEC16A-204ENST00000313084 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.43
SEC16A-204ENST00000313084 DTNBO60941 627 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 FOXD4L6Q3SYB3 417 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-204ENST00000313084 FOXD4L3Q6VB84 417 aaPredicted RBP12.33□□□□□ -0.44
SEC16A-204ENST00000313084 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 CDC45O75419 566 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 NBPF6Q5VWK0 638 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 NBPF4Q96M43 638 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 KIF13AQ9H1H9 1805 aa12.33□□□□□ -0.44
SEC16A-204ENST00000313084 SDSP20132 328 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
SEC16A-204ENST00000313084 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 PNMA6EA0A0J9YXQ4 647 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
SEC16A-204ENST00000313084 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
SEC16A-204ENST00000313084 ANKRD44Q8N8A2 993 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 DCTPP1Q9H773 170 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 TECPR2O15040 1411 aa12.31□□□□□ -0.44
SEC16A-204ENST00000313084 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-204ENST00000313084 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 NCLP19338 710 aaKnown RBP12.3□□□□□ -0.44
SEC16A-204ENST00000313084 MCM4P33991 863 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 TEFQ10587 303 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 ZNF530Q6P9A1 599 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-204ENST00000313084 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 RTL1A6NKG5 1358 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
SEC16A-204ENST00000313084 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 GNAI2P04899 355 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
SEC16A-204ENST00000313084 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
SEC16A-204ENST00000313084 OS9Q13438 667 aaPredicted RBP12.29□□□□□ -0.44
SEC16A-204ENST00000313084 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
SEC16A-204ENST00000313084 ITSN1Q15811 1721 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 HMMRO75330 724 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 KIF2CQ99661 725 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 TRAK2O60296 914 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
SEC16A-204ENST00000313084 PANK2Q9BZ23 570 aa12.28□□□□□ -0.44
SEC16A-204ENST00000313084 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 SURF6O75683 361 aaKnown RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 SSFA2P28290 1259 aa12.27□□□□□ -0.44
SEC16A-204ENST00000313084 RPAP2Q8IXW5 612 aaPredicted RBP12.27□□□□□ -0.44
SEC16A-204ENST00000313084 JARID2Q92833 1246 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms