RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 FCHSD2O94868 740 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 USP19O94966 1318 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 RIPK4P57078 832 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
RBFOX1-201ENST00000311745 CNKSR2Q8WXI2 1034 aa11.92□□□□□ -0.5
RBFOX1-201ENST00000311745 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
RBFOX1-201ENST00000311745 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
RBFOX1-201ENST00000311745 IGSF3O75054 1194 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 SSH1Q8WYL5 1049 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 RRS1Q15050 365 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 UTP14CQ5TAP6 766 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 ACEP12821 1306 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 SOX12O15370 315 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 FAM193AP78312 1265 aa11.91□□□□□ -0.5
RBFOX1-201ENST00000311745 LTN1O94822 1766 aa11.9□□□□□ -0.5
RBFOX1-201ENST00000311745 CT47B1P0C2W7 299 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-201ENST00000311745 TRIM27P14373 513 aa11.9□□□□□ -0.5
RBFOX1-201ENST00000311745 CBX1P83916 185 aa11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 SLC26A8Q96RN1 970 aa11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 ZSCAN20P17040 1043 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 SLKQ9H2G2 1235 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 PIK3R4Q99570 1358 aa11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 HMOX1P09601 288 aa11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 THUMPD2Q9BTF0 503 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-201ENST00000311745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 NFE2L2Q16236 605 aa11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 TBX22Q9Y458 520 aa11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 RGPD2P0DJD1 1756 aa11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-201ENST00000311745 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
RBFOX1-201ENST00000311745 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
RBFOX1-201ENST00000311745 RGS12O14924 1447 aa11.87□□□□□ -0.51
RBFOX1-201ENST00000311745 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
RBFOX1-201ENST00000311745 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-201ENST00000311745 SEC24BO95487 1268 aa11.86□□□□□ -0.51
RBFOX1-201ENST00000311745 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
RBFOX1-201ENST00000311745 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
RBFOX1-201ENST00000311745 KIF20AO95235 890 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 VAMP4O75379 141 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 CRB1P82279 1406 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 MAPK8IP3Q9UPT6 1336 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 NFAT5O94916 1531 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 UQCRHP07919 91 aa11.85□□□□□ -0.51
RBFOX1-201ENST00000311745 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 COG3Q96JB2 828 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 KCNJ4P48050 445 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 ZBTB40Q9NUA8 1239 aa11.84□□□□□ -0.51
RBFOX1-201ENST00000311745 KDRP35968 1356 aa11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 ALDH1L2Q3SY69 923 aa11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 DZIP1LQ8IYY4 767 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.52
RBFOX1-201ENST00000311745 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 LETM1O95202 739 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 HSP90AB2PQ58FF8 381 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 IFT57Q9NWB7 429 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
RBFOX1-201ENST00000311745 CRYBG1Q9Y4K1 1723 aa11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 CLGNO14967 610 aa11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 KCNA6P17658 529 aa11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
RBFOX1-201ENST00000311745 ARHGEF10O15013 1369 aa11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 ABCC4O15439 1325 aa11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 MED1Q15648 1581 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-201ENST00000311745 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-201ENST00000311745 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms