RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
PTPN2-201ENST00000309660 FLT4P35916 1363 aa14.41□□□□□ -0.1
PTPN2-201ENST00000309660 TTC21AQ8NDW8 1320 aa14.4□□□□□ -0.1
PTPN2-201ENST00000309660 SMARCA5O60264 1052 aaPredicted RBP14.4□□□□□ -0.1
PTPN2-201ENST00000309660 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
PTPN2-201ENST00000309660 IL27Q8NEV9 243 aa14.4□□□□□ -0.1
PTPN2-201ENST00000309660 C3P01024 1663 aa14.4□□□□□ -0.1
PTPN2-201ENST00000309660 PIK3R4Q99570 1358 aa14.39□□□□□ -0.11
PTPN2-201ENST00000309660 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
PTPN2-201ENST00000309660 BMP2KLQ5H9B9 411 aa14.39□□□□□ -0.11
PTPN2-201ENST00000309660 DLG5Q8TDM6 1919 aa14.39□□□□□ -0.11
PTPN2-201ENST00000309660 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
PTPN2-201ENST00000309660 VIRMAQ69YN4 1812 aaKnown RBP14.38□□□□□ -0.11
PTPN2-201ENST00000309660 TBC1D9Q6ZT07 1266 aa14.38□□□□□ -0.11
PTPN2-201ENST00000309660 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
PTPN2-201ENST00000309660 MSH6P52701 1360 aa14.38□□□□□ -0.11
PTPN2-201ENST00000309660 GAS2L2Q8NHY3 880 aa14.38□□□□□ -0.11
PTPN2-201ENST00000309660 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
PTPN2-201ENST00000309660 HSP90AB1P08238 724 aaKnown RBP14.38□□□□□ -0.11
PTPN2-201ENST00000309660 FKBP5Q13451 457 aaPredicted RBP14.38□□□□□ -0.11
PTPN2-201ENST00000309660 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
PTPN2-201ENST00000309660 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
PTPN2-201ENST00000309660 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
PTPN2-201ENST00000309660 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
PTPN2-201ENST00000309660 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
PTPN2-201ENST00000309660 HOXC9P31274 260 aa14.36□□□□□ -0.11
PTPN2-201ENST00000309660 INTS3Q68E01 1043 aaKnown RBP14.36□□□□□ -0.11
PTPN2-201ENST00000309660 USP31Q70CQ4 1352 aa14.36□□□□□ -0.11
PTPN2-201ENST00000309660 ANTXR1Q9H6X2 564 aa14.36□□□□□ -0.11
PTPN2-201ENST00000309660 PSME1Q06323 249 aa14.36□□□□□ -0.11
PTPN2-201ENST00000309660 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
PTPN2-201ENST00000309660 CEP85Q6P2H3 762 aa14.35□□□□□ -0.11
PTPN2-201ENST00000309660 GNAT3A8MTJ3 354 aa14.35□□□□□ -0.11
PTPN2-201ENST00000309660 PHF8Q9UPP1 1060 aa14.35□□□□□ -0.11
PTPN2-201ENST00000309660 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
PTPN2-201ENST00000309660 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
PTPN2-201ENST00000309660 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 ANKRD44Q8N8A2 993 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 ARHGEF10O15013 1369 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
PTPN2-201ENST00000309660 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 CDC45O75419 566 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 EXOC6BQ9Y2D4 811 aa14.34□□□□□ -0.11
PTPN2-201ENST00000309660 PTPRCP08575 1304 aa14.33□□□□□ -0.11
PTPN2-201ENST00000309660 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.11
PTPN2-201ENST00000309660 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
PTPN2-201ENST00000309660 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
PTPN2-201ENST00000309660 CRB1P82279 1406 aa14.33□□□□□ -0.12
PTPN2-201ENST00000309660 DIP2AQ14689 1571 aa14.33□□□□□ -0.12
PTPN2-201ENST00000309660 TSHZ3Q63HK5 1081 aa14.32□□□□□ -0.12
PTPN2-201ENST00000309660 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
PTPN2-201ENST00000309660 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
PTPN2-201ENST00000309660 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
PTPN2-201ENST00000309660 CEP170BQ9Y4F5 1589 aaPredicted RBP14.32□□□□□ -0.12
PTPN2-201ENST00000309660 RIMS1Q86UR5 1692 aaKnown RBP14.32□□□□□ -0.12
PTPN2-201ENST00000309660 RTL1A6NKG5 1358 aa14.31□□□□□ -0.12
PTPN2-201ENST00000309660 FLIIQ13045 1269 aa14.31□□□□□ -0.12
PTPN2-201ENST00000309660 IL17REQ8NFR9 667 aa14.31□□□□□ -0.12
PTPN2-201ENST00000309660 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
PTPN2-201ENST00000309660 HMMRO75330 724 aa14.31□□□□□ -0.12
PTPN2-201ENST00000309660 RBM25P49756 843 aaKnown RBP14.31□□□□□ -0.12
PTPN2-201ENST00000309660 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
PTPN2-201ENST00000309660 CD2BP2O95400 341 aaKnown RBP14.3□□□□□ -0.12
PTPN2-201ENST00000309660 LRRC59Q96AG4 307 aaKnown RBP14.3□□□□□ -0.12
PTPN2-201ENST00000309660 TTC22Q5TAA0 569 aa14.3□□□□□ -0.12
PTPN2-201ENST00000309660 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
PTPN2-201ENST00000309660 HDGFL1Q5TGJ6 251 aa14.29□□□□□ -0.12
PTPN2-201ENST00000309660 RGS12O14924 1447 aa14.29□□□□□ -0.12
PTPN2-201ENST00000309660 CCT4P50991 539 aaKnown RBP14.29□□□□□ -0.12
PTPN2-201ENST00000309660 NRKQ7Z2Y5 1582 aa14.29□□□□□ -0.12
PTPN2-201ENST00000309660 ARHGAP23Q9P227 1491 aa14.29□□□□□ -0.12
PTPN2-201ENST00000309660 GNAI2P04899 355 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
PTPN2-201ENST00000309660 SLIT1O75093 1534 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 ANXA1P04083 346 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 SDSP20132 328 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 MCM4P33991 863 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 ATP10DQ9P241 1426 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 ORAI2Q96SN7 254 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 KDRP35968 1356 aa14.28□□□□□ -0.12
PTPN2-201ENST00000309660 PHAXQ9H814 394 aaKnown RBP14.27□□□□□ -0.12
PTPN2-201ENST00000309660 LGR6Q9HBX8 967 aa14.27□□□□□ -0.12
PTPN2-201ENST00000309660 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
PTPN2-201ENST00000309660 CASC1Q6TDU7 716 aa14.27□□□□□ -0.13
PTPN2-201ENST00000309660 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.13
PTPN2-201ENST00000309660 MAP3K5Q99683 1374 aa14.27□□□□□ -0.13
PTPN2-201ENST00000309660 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
PTPN2-201ENST00000309660 KIF2CQ99661 725 aa14.26□□□□□ -0.13
PTPN2-201ENST00000309660 TEFQ10587 303 aa14.26□□□□□ -0.13
PTPN2-201ENST00000309660 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
PTPN2-201ENST00000309660 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
PTPN2-201ENST00000309660 KIF24Q5T7B8 1368 aa14.25□□□□□ -0.13
PTPN2-201ENST00000309660 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
PTPN2-201ENST00000309660 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
PTPN2-201ENST00000309660 RILPL2Q969X0 211 aa14.25□□□□□ -0.13
PTPN2-201ENST00000309660 KCNQ3O43525 872 aa14.24□□□□□ -0.13
PTPN2-201ENST00000309660 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
PTPN2-201ENST00000309660 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms