RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 PXDNLA1KZ92 1463 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 FLT4P35916 1363 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 CHL1O00533 1208 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 DDIT3P35638 169 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 KIF1AQ12756 1690 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 DCTN1Q14203 1278 aa9.11□□□□□ -0.95
RGPD3-201ENST00000304514 RBM25P49756 843 aaKnown RBP9.11□□□□□ -0.95
RGPD3-201ENST00000304514 TBX22Q9Y458 520 aa9.11□□□□□ -0.95
RGPD3-201ENST00000304514 IGSF1Q8N6C5 1336 aa9.11□□□□□ -0.95
RGPD3-201ENST00000304514 FRAT2O75474 233 aaPredicted RBP9.11□□□□□ -0.95
RGPD3-201ENST00000304514 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
RGPD3-201ENST00000304514 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
RGPD3-201ENST00000304514 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 MAP3K19Q56UN5 1328 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 LMTK3Q96Q04 1460 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 BECN1Q14457 450 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 GSE1Q14687 1217 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 AMOTL2Q9Y2J4 779 aa9.1□□□□□ -0.95
RGPD3-201ENST00000304514 BMP2KLQ5H9B9 411 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 C5P01031 1676 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 HSP90AB2PQ58FF8 381 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 C22orf23Q9BZE7 217 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 KIF2CQ99661 725 aa9.09□□□□□ -0.95
RGPD3-201ENST00000304514 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
RGPD3-201ENST00000304514 AK9Q5TCS8 1911 aa9.09□□□□□ -0.96
RGPD3-201ENST00000304514 NCAPD2Q15021 1401 aa9.09□□□□□ -0.96
RGPD3-201ENST00000304514 PTPRCP08575 1304 aa9.08□□□□□ -0.96
RGPD3-201ENST00000304514 STRCP1A6NGW2 1772 aa9.08□□□□□ -0.96
RGPD3-201ENST00000304514 MCM10Q7L590 875 aa9.08□□□□□ -0.96
RGPD3-201ENST00000304514 CHMP4BQ9H444 224 aaKnown RBP9.08□□□□□ -0.96
RGPD3-201ENST00000304514 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
RGPD3-201ENST00000304514 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
RGPD3-201ENST00000304514 KRT24Q2M2I5 525 aa9.07□□□□□ -0.96
RGPD3-201ENST00000304514 UPF2Q9HAU5 1272 aaKnown RBP9.07□□□□□ -0.96
RGPD3-201ENST00000304514 MFAP1P55081 439 aaKnown RBP9.07□□□□□ -0.96
RGPD3-201ENST00000304514 EID1Q9Y6B2 187 aa9.07□□□□□ -0.96
RGPD3-201ENST00000304514 SLC26A8Q96RN1 970 aa9.07□□□□□ -0.96
RGPD3-201ENST00000304514 GSPT1P15170 499 aaKnown RBP9.07□□□□□ -0.96
RGPD3-201ENST00000304514 SNX21Q969T3 373 aa9.07□□□□□ -0.96
RGPD3-201ENST00000304514 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 COL18A1P39060 1754 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 SCN11AQ9UI33 1791 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 MST1RQ04912 1400 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
RGPD3-201ENST00000304514 FOXO3O43524 673 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 DCTPP1Q9H773 170 aa9.06□□□□□ -0.96
RGPD3-201ENST00000304514 CEP85Q6P2H3 762 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 ABCC6O95255 1503 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 HOXC9P31274 260 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 PKD1L3Q7Z443 1732 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 HTATSF1O43719 755 aaKnown RBP9.05□□□□□ -0.96
RGPD3-201ENST00000304514 PLEKHM2Q8IWE5 1019 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 ANKRD45Q5TZF3 282 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 EYA1Q99502 592 aa9.05□□□□□ -0.96
RGPD3-201ENST00000304514 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
RGPD3-201ENST00000304514 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
RGPD3-201ENST00000304514 MAP3K5Q99683 1374 aa9.04□□□□□ -0.96
RGPD3-201ENST00000304514 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
RGPD3-201ENST00000304514 XIRP1Q702N8 1843 aaKnown RBP9.04□□□□□ -0.96
RGPD3-201ENST00000304514 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
RGPD3-201ENST00000304514 THEMISQ8N1K5 641 aaPredicted RBP9.03□□□□□ -0.96
RGPD3-201ENST00000304514 LAMB4A4D0S4 1761 aa9.03□□□□□ -0.96
RGPD3-201ENST00000304514 GLI3P10071 1580 aa9.03□□□□□ -0.96
RGPD3-201ENST00000304514 TTC22Q5TAA0 569 aa9.03□□□□□ -0.96
RGPD3-201ENST00000304514 CEMIPQ8WUJ3 1361 aa9.03□□□□□ -0.96
RGPD3-201ENST00000304514 OVOS2A0A0G2JMS6 1433 aa9.03□□□□□ -0.96
RGPD3-201ENST00000304514 SLKQ9H2G2 1235 aaPredicted RBP9.03□□□□□ -0.96
RGPD3-201ENST00000304514 PAPPAQ13219 1627 aa9.02□□□□□ -0.97
RGPD3-201ENST00000304514 KCNA6P17658 529 aa9.02□□□□□ -0.97
RGPD3-201ENST00000304514 PXDNQ92626 1479 aa9.02□□□□□ -0.97
RGPD3-201ENST00000304514 G2E3Q7L622 706 aa9.01□□□□□ -0.97
RGPD3-201ENST00000304514 MIS18AQ9NYP9 233 aa9.01□□□□□ -0.97
RGPD3-201ENST00000304514 SALL3Q9BXA9 1300 aa9.01□□□□□ -0.97
RGPD3-201ENST00000304514 CD2BP2O95400 341 aaKnown RBP9.01□□□□□ -0.97
RGPD3-201ENST00000304514 SOS1Q07889 1333 aaPredicted RBP9.01□□□□□ -0.97
RGPD3-201ENST00000304514 RPAP2Q8IXW5 612 aaPredicted RBP9.01□□□□□ -0.97
RGPD3-201ENST00000304514 CDC45O75419 566 aa9.01□□□□□ -0.97
RGPD3-201ENST00000304514 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
RGPD3-201ENST00000304514 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 ABCA3Q99758 1704 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 SHANK3Q9BYB0 1731 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 C16orf71Q8IYS4 520 aaPredicted RBP9□□□□□ -0.97
RGPD3-201ENST00000304514 MEIS3Q99687 375 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
RGPD3-201ENST00000304514 IL27Q8NEV9 243 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 NUP188Q5SRE5 1749 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 ARFGEF2Q9Y6D5 1785 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 GNAT3A8MTJ3 354 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 SLC4A2P04920 1241 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 OTUD7AQ8TE49 926 aaPredicted RBP9□□□□□ -0.97
RGPD3-201ENST00000304514 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
RGPD3-201ENST00000304514 AFDNP55196 1824 aaKnown RBP8.99□□□□□ -0.97
RGPD3-201ENST00000304514 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
RGPD3-201ENST00000304514 HSCBQ8IWL3 235 aa8.99□□□□□ -0.97
RGPD3-201ENST00000304514 NGDNQ8NEJ9 315 aaKnown RBP8.99□□□□□ -0.97
RGPD3-201ENST00000304514 CCT4P50991 539 aaKnown RBP8.99□□□□□ -0.97
RGPD3-201ENST00000304514 CHMP5Q9NZZ3 219 aa8.99□□□□□ -0.97
RGPD3-201ENST00000304514 OSBPL3Q9H4L5 887 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms