RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 NOM1Q5C9Z4 860 aaKnown RBP24.92■■□□□ 1.58
LETM1-201ENST00000302787 DUSP27Q5VZP5 1158 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 NACAP1Q9BZK3 213 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 MCM10Q7L590 875 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 NUP62CLQ9H1M0 184 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 CCDC61Q9Y6R9 512 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 CDK5RAP3Q96JB5 506 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 CCDC57Q2TAC2 916 aa24.92■■□□□ 1.58
LETM1-201ENST00000302787 KRT32Q14532 448 aa24.91■■□□□ 1.58
LETM1-201ENST00000302787 CCDC69A6NI79 296 aa24.91■■□□□ 1.58
LETM1-201ENST00000302787 SMARCA5O60264 1052 aaPredicted RBP24.91■■□□□ 1.58
LETM1-201ENST00000302787 MX1P20591 662 aa24.91■■□□□ 1.58
LETM1-201ENST00000302787 FKBP4Q02790 459 aaKnown RBP eCLIP24.91■■□□□ 1.58
LETM1-201ENST00000302787 CFAP45Q9UL16 551 aa24.91■■□□□ 1.58
LETM1-201ENST00000302787 ZSCAN25Q6NSZ9 544 aa24.91■■□□□ 1.58
LETM1-201ENST00000302787 CASTP20810 708 aaKnown RBP24.9■■□□□ 1.58
LETM1-201ENST00000302787 DACH1Q9UI36 760 aa24.9■■□□□ 1.58
LETM1-201ENST00000302787 CCDC112Q8NEF3 446 aa24.9■■□□□ 1.58
LETM1-201ENST00000302787 IKQ13123 557 aaPredicted RBP24.89■■□□□ 1.58
LETM1-201ENST00000302787 DCTN1Q14203 1278 aa24.89■■□□□ 1.58
LETM1-201ENST00000302787 RPRD2Q5VT52 1461 aaKnown RBP24.89■■□□□ 1.57
LETM1-201ENST00000302787 STK11IPQ8N1F8 1099 aa24.89■■□□□ 1.57
LETM1-201ENST00000302787 DDX54Q8TDD1 881 aaKnown RBP24.88■■□□□ 1.57
LETM1-201ENST00000302787 SYCE3A1L190 88 aa24.88■■□□□ 1.57
LETM1-201ENST00000302787 TOM1L2Q6ZVM7 507 aa24.88■■□□□ 1.57
LETM1-201ENST00000302787 CTNNA3Q9UI47 895 aa24.88■■□□□ 1.57
LETM1-201ENST00000302787 UQCRHLA0A096LP55 91 aa24.87■■□□□ 1.57
LETM1-201ENST00000302787 UQCRHP07919 91 aa24.87■■□□□ 1.57
LETM1-201ENST00000302787 KIF1BPQ96EK5 621 aa24.87■■□□□ 1.57
LETM1-201ENST00000302787 KIF14Q15058 1648 aa24.87■■□□□ 1.57
LETM1-201ENST00000302787 PPFIBP1Q86W92 1011 aa24.87■■□□□ 1.57
LETM1-201ENST00000302787 CWC15Q9P013 229 aaKnown RBP24.86■■□□□ 1.57
LETM1-201ENST00000302787 RAB11FIP3O75154 756 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 PDIA4P13667 645 aaKnown RBP24.86■■□□□ 1.57
LETM1-201ENST00000302787 WAPLQ7Z5K2 1190 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 CEP57L1Q8IYX8 460 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 CDKL5O76039 1030 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 CEP126Q9P2H0 1117 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 PLB1Q6P1J6 1458 aa24.86■■□□□ 1.57
LETM1-201ENST00000302787 NUP133Q8WUM0 1156 aa24.85■■□□□ 1.57
LETM1-201ENST00000302787 CBFA2T2O43439 604 aa24.85■■□□□ 1.57
LETM1-201ENST00000302787 ODF2Q5BJF6 829 aa24.85■■□□□ 1.57
LETM1-201ENST00000302787 ZNHIT6Q9NWK9 470 aaKnown RBP24.84■■□□□ 1.57
LETM1-201ENST00000302787 TBC1D2Q9BYX2 928 aa24.84■■□□□ 1.57
LETM1-201ENST00000302787 CCAR1Q8IX12 1150 aaKnown RBP24.84■■□□□ 1.57
LETM1-201ENST00000302787 GLRX3O76003 335 aaKnown RBP24.83■■□□□ 1.57
LETM1-201ENST00000302787 UPF3BQ9BZI7 483 aaKnown RBP24.83■■□□□ 1.57
LETM1-201ENST00000302787 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
LETM1-201ENST00000302787 CCDC66A2RUB6 948 aa24.83■■□□□ 1.56
LETM1-201ENST00000302787 ADGRF5Q8IZF2 1346 aa24.83■■□□□ 1.56
LETM1-201ENST00000302787 MAP3K11Q16584 847 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 HSP90AB2PQ58FF8 381 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 MPHOSPH8Q99549 860 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 ZSCAN30Q86W11 494 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 CCDC83Q8IWF9 413 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 TRIM27P14373 513 aa24.82■■□□□ 1.56
LETM1-201ENST00000302787 KRT18P05783 430 aaKnown RBP24.82■■□□□ 1.56
LETM1-201ENST00000302787 PRPF40BQ6NWY9 871 aaKnown RBP24.81■■□□□ 1.56
LETM1-201ENST00000302787 NME9Q86XW9 330 aa24.81■■□□□ 1.56
LETM1-201ENST00000302787 DDX11Q96FC9 970 aa24.81■■□□□ 1.56
LETM1-201ENST00000302787 NOL7Q9UMY1 257 aaKnown RBP24.81■■□□□ 1.56
LETM1-201ENST00000302787 SCAF11Q99590 1463 aaKnown RBP24.8■■□□□ 1.56
LETM1-201ENST00000302787 STIM1Q13586 685 aa24.8■■□□□ 1.56
LETM1-201ENST00000302787 EMILIN1Q9Y6C2 1016 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 MYO6Q9UM54 1294 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 DISP3Q9P2K9 1392 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 ZFYVE27Q5T4F4 411 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 FERMT3Q86UX7 667 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 FILIP1Q7Z7B0 1213 aa24.79■■□□□ 1.56
LETM1-201ENST00000302787 SSFA2P28290 1259 aa24.78■■□□□ 1.56
LETM1-201ENST00000302787 TDO2P48775 406 aa24.78■■□□□ 1.56
LETM1-201ENST00000302787 ANKLE2Q86XL3 938 aa24.78■■□□□ 1.56
LETM1-201ENST00000302787 CAMK4Q16566 473 aa24.78■■□□□ 1.56
LETM1-201ENST00000302787 FAM177A1Q8N128 213 aaPredicted RBP24.78■■□□□ 1.56
LETM1-201ENST00000302787 IMMTQ16891 758 aaKnown RBP24.77■■□□□ 1.56
LETM1-201ENST00000302787 TNPO1Q92973 898 aaKnown RBP24.77■■□□□ 1.56
LETM1-201ENST00000302787 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
LETM1-201ENST00000302787 F6X3S4 739 aa24.77■■□□□ 1.56
LETM1-201ENST00000302787 XPCQ01831 940 aaPredicted RBP24.77■■□□□ 1.56
LETM1-201ENST00000302787 UBAC1Q9BSL1 405 aa24.77■■□□□ 1.56
LETM1-201ENST00000302787 SMTNL1A8MU46 457 aa24.76■■□□□ 1.55
LETM1-201ENST00000302787 KCNH5Q8NCM2 988 aa24.76■■□□□ 1.55
LETM1-201ENST00000302787 PLEKHH1Q9ULM0 1364 aa24.75■■□□□ 1.55
LETM1-201ENST00000302787 AXDND1Q5T1B0 1012 aaPredicted RBP24.75■■□□□ 1.55
LETM1-201ENST00000302787 CCDC183Q5T5S1 534 aa24.75■■□□□ 1.55
LETM1-201ENST00000302787 LEKR1Q6ZMV7 388 aa24.75■■□□□ 1.55
LETM1-201ENST00000302787 H0YHG0 523 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 IGHDP01880 384 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 WASF1Q92558 559 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 PRDM11Q9NQV5 511 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 BOLA2Q9H3K6 86 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 DEF6Q9H4E7 631 aa24.74■■□□□ 1.55
LETM1-201ENST00000302787 SKIDA1Q1XH10 827 aa24.73■■□□□ 1.55
LETM1-201ENST00000302787 CCDC85AQ96PX6 553 aaPredicted RBP24.73■■□□□ 1.55
LETM1-201ENST00000302787 SH2B1Q9NRF2 756 aaPredicted RBP24.73■■□□□ 1.55
LETM1-201ENST00000302787 NSD2O96028 1365 aa24.73■■□□□ 1.55
LETM1-201ENST00000302787 SOGA3Q5TF21 947 aa24.73■■□□□ 1.55
LETM1-201ENST00000302787 IDH1O75874 414 aaKnown RBP24.73■■□□□ 1.55
LETM1-201ENST00000302787 ATP2B2Q01814 1243 aa24.73■■□□□ 1.55
LETM1-201ENST00000302787 LARP1Q6PKG0 1096 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms