RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
VPREB1-201ENST00000302273 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
VPREB1-201ENST00000302273 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
VPREB1-201ENST00000302273 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
VPREB1-201ENST00000302273 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
VPREB1-201ENST00000302273 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
VPREB1-201ENST00000302273 GLI3P10071 1580 aa11.75□□□□□ -0.53
VPREB1-201ENST00000302273 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
VPREB1-201ENST00000302273 FAM196AQ6ZSG2 479 aa11.75□□□□□ -0.53
VPREB1-201ENST00000302273 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
VPREB1-201ENST00000302273 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
VPREB1-201ENST00000302273 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
VPREB1-201ENST00000302273 A0A0G2JS52 829 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 MYT1Q01538 1121 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 CCDC125Q86Z20 511 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 NGEFQ8N5V2 710 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
VPREB1-201ENST00000302273 RGS12O14924 1447 aa11.73□□□□□ -0.53
VPREB1-201ENST00000302273 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
VPREB1-201ENST00000302273 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
VPREB1-201ENST00000302273 TNS2Q63HR2 1409 aa11.73□□□□□ -0.53
VPREB1-201ENST00000302273 ADAMTS8Q9UP79 889 aa11.73□□□□□ -0.53
VPREB1-201ENST00000302273 EP400Q96L91 3159 aa11.73□□□□□ -0.53
VPREB1-201ENST00000302273 HMOX1P09601 288 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 USHBP1Q8N6Y0 703 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 PLEKHF1Q96S99 279 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
VPREB1-201ENST00000302273 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.53
VPREB1-201ENST00000302273 C1orf141Q5JVX7 400 aa11.71□□□□□ -0.53
VPREB1-201ENST00000302273 RUNDC1Q96C34 613 aa11.71□□□□□ -0.53
VPREB1-201ENST00000302273 DCAF5Q96JK2 942 aa11.71□□□□□ -0.53
VPREB1-201ENST00000302273 MEGF6O75095 1541 aa11.7□□□□□ -0.54
VPREB1-201ENST00000302273 MAPK8IP3Q9UPT6 1336 aa11.7□□□□□ -0.54
VPREB1-201ENST00000302273 PHKG2P15735 406 aa11.7□□□□□ -0.54
VPREB1-201ENST00000302273 MARCH10Q8NA82 808 aaPredicted RBP11.7□□□□□ -0.54
VPREB1-201ENST00000302273 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
VPREB1-201ENST00000302273 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
VPREB1-201ENST00000302273 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
VPREB1-201ENST00000302273 CYP27B1O15528 508 aa11.69□□□□□ -0.54
VPREB1-201ENST00000302273 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
VPREB1-201ENST00000302273 DDX54Q8TDD1 881 aaKnown RBP11.69□□□□□ -0.54
VPREB1-201ENST00000302273 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
VPREB1-201ENST00000302273 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
VPREB1-201ENST00000302273 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
VPREB1-201ENST00000302273 MIER1Q8N108 512 aa11.68□□□□□ -0.54
VPREB1-201ENST00000302273 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
VPREB1-201ENST00000302273 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
VPREB1-201ENST00000302273 CCDC184Q52MB2 194 aa11.67□□□□□ -0.54
VPREB1-201ENST00000302273 BCL11BQ9C0K0 894 aaPredicted RBP11.67□□□□□ -0.54
VPREB1-201ENST00000302273 CCDC27Q2M243 656 aa11.66□□□□□ -0.54
VPREB1-201ENST00000302273 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
VPREB1-201ENST00000302273 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
VPREB1-201ENST00000302273 CALD1Q05682 793 aaKnown RBP11.65□□□□□ -0.54
VPREB1-201ENST00000302273 BABAM1Q9NWV8 329 aa11.65□□□□□ -0.54
VPREB1-201ENST00000302273 MAP3K5Q99683 1374 aa11.65□□□□□ -0.55
VPREB1-201ENST00000302273 LRRC37A3O60309 1634 aa11.64□□□□□ -0.55
VPREB1-201ENST00000302273 PLSCR1O15162 318 aa11.63□□□□□ -0.55
VPREB1-201ENST00000302273 RIPK4P57078 832 aa11.63□□□□□ -0.55
VPREB1-201ENST00000302273 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
VPREB1-201ENST00000302273 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
VPREB1-201ENST00000302273 PKD1L3Q7Z443 1732 aa11.63□□□□□ -0.55
VPREB1-201ENST00000302273 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
VPREB1-201ENST00000302273 CABP4P57796 275 aa11.62□□□□□ -0.55
VPREB1-201ENST00000302273 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
VPREB1-201ENST00000302273 SMARCC1Q92922 1105 aaPredicted RBP11.62□□□□□ -0.55
VPREB1-201ENST00000302273 SLC52A2Q9HAB3 445 aa11.62□□□□□ -0.55
VPREB1-201ENST00000302273 WNK3Q9BYP7 1800 aa11.61□□□□□ -0.55
VPREB1-201ENST00000302273 APAF1O14727 1248 aa11.61□□□□□ -0.55
VPREB1-201ENST00000302273 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
VPREB1-201ENST00000302273 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
VPREB1-201ENST00000302273 TMOD3Q9NYL9 352 aa11.61□□□□□ -0.55
VPREB1-201ENST00000302273 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
VPREB1-201ENST00000302273 TEFQ10587 303 aa11.6□□□□□ -0.55
VPREB1-201ENST00000302273 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
VPREB1-201ENST00000302273 TRIM37O94972 964 aa11.59□□□□□ -0.55
VPREB1-201ENST00000302273 TAF7Q15545 349 aaPredicted RBP11.59□□□□□ -0.55
VPREB1-201ENST00000302273 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
VPREB1-201ENST00000302273 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
VPREB1-201ENST00000302273 NFATC2IPQ8NCF5 419 aa11.59□□□□□ -0.55
VPREB1-201ENST00000302273 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
VPREB1-201ENST00000302273 CENPBP07199 599 aaPredicted RBP11.58□□□□□ -0.56
VPREB1-201ENST00000302273 BAG6P46379 1132 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 PIGBQ92521 554 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 SYTL4Q96C24 671 aaPredicted RBP11.58□□□□□ -0.56
VPREB1-201ENST00000302273 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
VPREB1-201ENST00000302273 IL16Q14005 1332 aa11.58□□□□□ -0.56
VPREB1-201ENST00000302273 KCNQ2O43526 872 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 APBA3O96018 575 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 VSIG10Q8N0Z9 540 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms