RNA–Protein interactions for RNA: ENST00000298919.7

PDZRN4-201, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 2 BASIC

Gene PDZRN4, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-201ENST00000298919 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
PDZRN4-201ENST00000298919 FER1L4A9Z1Z3 1794 aa8.2□□□□□ -1.1
PDZRN4-201ENST00000298919 CHL1O00533 1208 aa8.2□□□□□ -1.1
PDZRN4-201ENST00000298919 CHD1LQ86WJ1 897 aa8.2□□□□□ -1.1
PDZRN4-201ENST00000298919 KIF2CQ99661 725 aa8.2□□□□□ -1.1
PDZRN4-201ENST00000298919 IPO8O15397 1037 aaKnown RBP8.19□□□□□ -1.1
PDZRN4-201ENST00000298919 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
PDZRN4-201ENST00000298919 ZNF428Q96B54 188 aa8.19□□□□□ -1.1
PDZRN4-201ENST00000298919 MTHFSDQ2M296 383 aaKnown RBP8.19□□□□□ -1.1
PDZRN4-201ENST00000298919 SLKQ9H2G2 1235 aaPredicted RBP8.19□□□□□ -1.1
PDZRN4-201ENST00000298919 HDGFP51858 240 aaKnown RBP8.18□□□□□ -1.1
PDZRN4-201ENST00000298919 MFAP1P55081 439 aaKnown RBP8.18□□□□□ -1.1
PDZRN4-201ENST00000298919 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
PDZRN4-201ENST00000298919 C16orf71Q8IYS4 520 aaPredicted RBP8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 EYA1Q99502 592 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 KDRP35968 1356 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 CD2BP2O95400 341 aaKnown RBP8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 KCNA6P17658 529 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 G2E3Q7L622 706 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 SPRYD3Q8NCJ5 442 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 C22orf23Q9BZE7 217 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 LRRC37A3O60309 1634 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 ANKRD45Q5TZF3 282 aa8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 OTUD7AQ8TE49 926 aaPredicted RBP8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 RBM33Q96EV2 1170 aaKnown RBP8.17□□□□□ -1.1
PDZRN4-201ENST00000298919 GSE1Q14687 1217 aa8.16□□□□□ -1.1
PDZRN4-201ENST00000298919 NUTM2GQ5VZR2 741 aa8.16□□□□□ -1.1
PDZRN4-201ENST00000298919 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
PDZRN4-201ENST00000298919 DDIT3P35638 169 aa8.16□□□□□ -1.1
PDZRN4-201ENST00000298919 INTS3Q68E01 1043 aaKnown RBP8.16□□□□□ -1.1
PDZRN4-201ENST00000298919 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 MSH6P52701 1360 aa8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 CALD1Q05682 793 aaKnown RBP8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 RGPD2P0DJD1 1756 aa8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.1
PDZRN4-201ENST00000298919 SBNO1A3KN83 1393 aa8.15□□□□□ -1.11
PDZRN4-201ENST00000298919 KIAA0232Q92628 1395 aa8.15□□□□□ -1.11
PDZRN4-201ENST00000298919 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.11
PDZRN4-201ENST00000298919 MEIS3Q99687 375 aa8.15□□□□□ -1.11
PDZRN4-201ENST00000298919 NCOA3Q9Y6Q9 1424 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 CHD2O14647 1828 aaKnown RBP8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 TBC1D9Q6ZT07 1266 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 DCTPP1Q9H773 170 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 TUBGCP6Q96RT7 1819 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 RTL1A6NKG5 1358 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 F6X3S4 739 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 LTN1O94822 1766 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 FLT4P35916 1363 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 FAM208AQ9UK61 1670 aaKnown RBP8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 TTC21AQ8NDW8 1320 aa8.14□□□□□ -1.11
PDZRN4-201ENST00000298919 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 CEP85Q6P2H3 762 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 GCC1Q96CN9 775 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 EID1Q9Y6B2 187 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 KIF24Q5T7B8 1368 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 HOXC9P31274 260 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 IL17REQ8NFR9 667 aa8.13□□□□□ -1.11
PDZRN4-201ENST00000298919 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 API5Q9BZZ5 524 aaKnown RBP8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 ANKRD44Q8N8A2 993 aa8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 USHBP1Q8N6Y0 703 aa8.12□□□□□ -1.11
PDZRN4-201ENST00000298919 NFAT5O94916 1531 aa8.11□□□□□ -1.11
PDZRN4-201ENST00000298919 NLRP6P59044 892 aa8.11□□□□□ -1.11
PDZRN4-201ENST00000298919 BECN1Q14457 450 aa8.11□□□□□ -1.11
PDZRN4-201ENST00000298919 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
PDZRN4-201ENST00000298919 UPF2Q9HAU5 1272 aaKnown RBP8.11□□□□□ -1.11
PDZRN4-201ENST00000298919 ANKARQ7Z5J8 1434 aa8.1□□□□□ -1.11
PDZRN4-201ENST00000298919 AK9Q5TCS8 1911 aa8.1□□□□□ -1.11
PDZRN4-201ENST00000298919 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
PDZRN4-201ENST00000298919 NECTIN2Q92692 538 aa8.1□□□□□ -1.11
PDZRN4-201ENST00000298919 TSPYL4Q9UJ04 414 aa8.1□□□□□ -1.11
PDZRN4-201ENST00000298919 AMPHP49418 695 aa8.09□□□□□ -1.11
PDZRN4-201ENST00000298919 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
PDZRN4-201ENST00000298919 PTPRCP08575 1304 aa8.09□□□□□ -1.11
PDZRN4-201ENST00000298919 SNX21Q969T3 373 aa8.09□□□□□ -1.11
PDZRN4-201ENST00000298919 LTV1Q96GA3 475 aaPredicted RBP8.09□□□□□ -1.12
PDZRN4-201ENST00000298919 MED1Q15648 1581 aaPredicted RBP8.09□□□□□ -1.12
PDZRN4-201ENST00000298919 PNMA6EA0A0J9YXQ4 647 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 APBB1O00213 710 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 NBPF6Q5VWK0 638 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 TSHZ3Q63HK5 1081 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 ABTB2Q8N961 1025 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 NBPF4Q96M43 638 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 SALL3Q9BXA9 1300 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 KCNQ3O43525 872 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 SDSP20132 328 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 ZNF142P52746 1687 aaPredicted RBP8.08□□□□□ -1.12
PDZRN4-201ENST00000298919 MCM4P33991 863 aa8.07□□□□□ -1.12
PDZRN4-201ENST00000298919 KDM3BQ7LBC6 1761 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms