RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 ADGRL3Q9HAR2 1447 aa19.13■□□□□ 0.65
LRRTM1-201ENST00000295057 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 FOXO3O43524 673 aa19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 LTV1Q96GA3 475 aaPredicted RBP19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 PSME1Q06323 249 aa19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 IL16Q14005 1332 aa19.12■□□□□ 0.65
LRRTM1-201ENST00000295057 GAS2L3Q86XJ1 694 aa19.11■□□□□ 0.65
LRRTM1-201ENST00000295057 LMTK3Q96Q04 1460 aa19.11■□□□□ 0.65
LRRTM1-201ENST00000295057 ZBTB7CA1YPR0 619 aa19.1■□□□□ 0.65
LRRTM1-201ENST00000295057 TSPYL6Q8N831 410 aa19.1■□□□□ 0.65
LRRTM1-201ENST00000295057 MCM10Q7L590 875 aa19.09■□□□□ 0.65
LRRTM1-201ENST00000295057 EYA1Q99502 592 aa19.09■□□□□ 0.65
LRRTM1-201ENST00000295057 MBIPQ9NS73 344 aa19.09■□□□□ 0.65
LRRTM1-201ENST00000295057 DDX11L8A8MPP1 907 aa19.08■□□□□ 0.65
LRRTM1-201ENST00000295057 AAMPQ13685 434 aa19.08■□□□□ 0.65
LRRTM1-201ENST00000295057 HSCBQ8IWL3 235 aa19.08■□□□□ 0.65
LRRTM1-201ENST00000295057 SBNO1A3KN83 1393 aa19.08■□□□□ 0.65
LRRTM1-201ENST00000295057 FLT4P35916 1363 aa19.08■□□□□ 0.65
LRRTM1-201ENST00000295057 MVPQ14764 893 aaKnown RBP19.07■□□□□ 0.64
LRRTM1-201ENST00000295057 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
LRRTM1-201ENST00000295057 HOXC9P31274 260 aa19.07■□□□□ 0.64
LRRTM1-201ENST00000295057 NOB1Q9ULX3 412 aaKnown RBP19.07■□□□□ 0.64
LRRTM1-201ENST00000295057 TNPO1Q92973 898 aaKnown RBP19.06■□□□□ 0.64
LRRTM1-201ENST00000295057 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
LRRTM1-201ENST00000295057 DDIT3P35638 169 aa19.05■□□□□ 0.64
LRRTM1-201ENST00000295057 USHBP1Q8N6Y0 703 aa19.05■□□□□ 0.64
LRRTM1-201ENST00000295057 DDX17Q92841 729 aaKnown RBP19.05■□□□□ 0.64
LRRTM1-201ENST00000295057 ZKSCAN2Q63HK3 967 aa19.05■□□□□ 0.64
LRRTM1-201ENST00000295057 ZNF853P0CG23 659 aa19.04■□□□□ 0.64
LRRTM1-201ENST00000295057 TRIM27P14373 513 aa19.04■□□□□ 0.64
LRRTM1-201ENST00000295057 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
LRRTM1-201ENST00000295057 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
LRRTM1-201ENST00000295057 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
LRRTM1-201ENST00000295057 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 GNAI1P63096 354 aa19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 MIS18AQ9NYP9 233 aa19.03■□□□□ 0.64
LRRTM1-201ENST00000295057 CT47B1P0C2W7 299 aaPredicted RBP19.02■□□□□ 0.64
LRRTM1-201ENST00000295057 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
LRRTM1-201ENST00000295057 VAMP4O75379 141 aa19.02■□□□□ 0.64
LRRTM1-201ENST00000295057 DZIP1LQ8IYY4 767 aaKnown RBP19.02■□□□□ 0.64
LRRTM1-201ENST00000295057 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
LRRTM1-201ENST00000295057 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
LRRTM1-201ENST00000295057 PDCL3Q9H2J4 239 aa19.01■□□□□ 0.63
LRRTM1-201ENST00000295057 FOXD4L1Q9NU39 408 aa19.01■□□□□ 0.63
LRRTM1-201ENST00000295057 LMOD3Q0VAK6 560 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 C19orf44Q9H6X5 657 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 ISY1Q9ULR0 285 aaKnown RBP19■□□□□ 0.63
LRRTM1-201ENST00000295057 TMEM94Q12767 1356 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 ARHGEF10O15013 1369 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 TPM2P07951 284 aa19■□□□□ 0.63
LRRTM1-201ENST00000295057 CALD1Q05682 793 aaKnown RBP18.99■□□□□ 0.63
LRRTM1-201ENST00000295057 ATF7IPQ6VMQ6 1270 aa18.99■□□□□ 0.63
LRRTM1-201ENST00000295057 TWISTNBQ3B726 338 aaPredicted RBP18.98■□□□□ 0.63
LRRTM1-201ENST00000295057 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
LRRTM1-201ENST00000295057 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
LRRTM1-201ENST00000295057 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
LRRTM1-201ENST00000295057 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
LRRTM1-201ENST00000295057 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 SMC5Q8IY18 1101 aa18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 KDRP35968 1356 aa18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 RBM25P49756 843 aaKnown RBP18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 HDAC1Q13547 482 aaPredicted RBP18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 RAB3GAP1Q15042 981 aa18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 KIAA1211Q6ZU35 1233 aa18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 LRRC59Q96AG4 307 aaKnown RBP18.96■□□□□ 0.63
LRRTM1-201ENST00000295057 ATF3P18847 181 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 MRPL50Q8N5N7 158 aaKnown RBP18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 STRCP1A6NGW2 1772 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 GCP02774 474 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 SNX21Q969T3 373 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
LRRTM1-201ENST00000295057 ALDH1L2Q3SY69 923 aa18.94■□□□□ 0.62
LRRTM1-201ENST00000295057 IP6K1Q92551 441 aa18.94■□□□□ 0.62
LRRTM1-201ENST00000295057 CHL1O00533 1208 aa18.93■□□□□ 0.62
LRRTM1-201ENST00000295057 NFAT5O94916 1531 aa18.93■□□□□ 0.62
LRRTM1-201ENST00000295057 KIF2CQ99661 725 aa18.92■□□□□ 0.62
LRRTM1-201ENST00000295057 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
LRRTM1-201ENST00000295057 STRCQ7RTU9 1775 aa18.92■□□□□ 0.62
LRRTM1-201ENST00000295057 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
LRRTM1-201ENST00000295057 KIF16BQ96L93 1317 aa18.92■□□□□ 0.62
LRRTM1-201ENST00000295057 CRB1P82279 1406 aa18.91■□□□□ 0.62
LRRTM1-201ENST00000295057 AXIN2Q9Y2T1 843 aa18.91■□□□□ 0.62
LRRTM1-201ENST00000295057 NASPP49321 788 aaPredicted RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 ZC3H6P61129 1189 aaKnown RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 SKOR2Q2VWA4 1001 aaPredicted RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 SSFA2P28290 1259 aa18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 KCNH5Q8NCM2 988 aa18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms