RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 K7ELQ4 463 aaPredicted RBP11.97□□□□□ -0.49
KPNB1-201ENST00000290158 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
KPNB1-201ENST00000290158 TWISTNBQ3B726 338 aaPredicted RBP11.97□□□□□ -0.49
KPNB1-201ENST00000290158 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
KPNB1-201ENST00000290158 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 CCDC158Q5M9N0 1113 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 UBXN4Q92575 508 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
KPNB1-201ENST00000290158 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 FAM107BQ9H098 131 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 CLCN1P35523 988 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 TCP11L2Q8N4U5 519 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
KPNB1-201ENST00000290158 GRIN2AQ12879 1464 aa11.96□□□□□ -0.49
KPNB1-201ENST00000290158 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
KPNB1-201ENST00000290158 MIS18AQ9NYP9 233 aa11.96□□□□□ -0.49
KPNB1-201ENST00000290158 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
KPNB1-201ENST00000290158 FAM193AP78312 1265 aa11.96□□□□□ -0.5
KPNB1-201ENST00000290158 EXOSC9Q06265 439 aaKnown RBP11.96□□□□□ -0.5
KPNB1-201ENST00000290158 DDX11Q96FC9 970 aa11.96□□□□□ -0.5
KPNB1-201ENST00000290158 KIAA1107Q9UPP5 1409 aa11.96□□□□□ -0.5
KPNB1-201ENST00000290158 SLC3A2P08195 630 aaKnown RBP11.96□□□□□ -0.5
KPNB1-201ENST00000290158 PDZRN3Q9UPQ7 1066 aa11.96□□□□□ -0.5
KPNB1-201ENST00000290158 MCM5P33992 734 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 AKNAQ7Z591 1439 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 SHTN1A0MZ66 631 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
KPNB1-201ENST00000290158 CCDC57Q2TAC2 916 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 FIBPO43427 364 aa11.95□□□□□ -0.5
KPNB1-201ENST00000290158 IPO4Q8TEX9 1081 aaKnown RBP11.95□□□□□ -0.5
KPNB1-201ENST00000290158 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
KPNB1-201ENST00000290158 SAFBQ15424 915 aaKnown RBP eCLIP11.94□□□□□ -0.5
KPNB1-201ENST00000290158 FILIP1LQ4L180 1135 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 GTPBP4Q9BZE4 634 aaKnown RBP11.94□□□□□ -0.5
KPNB1-201ENST00000290158 BRMS1Q9HCU9 246 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
KPNB1-201ENST00000290158 NEK4P51957 841 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 CUL7Q14999 1698 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 PDCP20941 246 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
KPNB1-201ENST00000290158 PCF11O94913 1555 aaKnown RBP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 STARD3NLO95772 234 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 MPHOSPH10O00566 681 aaKnown RBP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 KRT28Q7Z3Y7 464 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 GBP3Q9H0R5 595 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 CCDC141Q6ZP82 1450 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 WDR33Q9C0J8 1336 aaKnown RBP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 FKBP4Q02790 459 aaKnown RBP eCLIP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
KPNB1-201ENST00000290158 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
KPNB1-201ENST00000290158 OFD1O75665 1012 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 ERLIN2O94905 339 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 CHMP4BP1P59074 171 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 PSMA5P28066 241 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 PNISRQ8TF01 805 aaKnown RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 SERPINC1P01008 464 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 PTPN14Q15678 1187 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 C11orf95C9JLR9 678 aaPredicted RBP11.92□□□□□ -0.5
KPNB1-201ENST00000290158 WWC2Q6AWC2 1192 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
KPNB1-201ENST00000290158 FANCAO15360 1455 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 IGHMBP2P38935 993 aaKnown RBP11.91□□□□□ -0.5
KPNB1-201ENST00000290158 GNAI3P08754 354 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 HSPA2P54652 639 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 GRM1Q13255 1194 aa11.91□□□□□ -0.5
KPNB1-201ENST00000290158 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■□□□ 14.4
KPNB1-201ENST00000290158 SYCE3A1L190 88 aa11.9□□□□□ -0.5
KPNB1-201ENST00000290158 ANKRD62A6NC57 917 aa11.9□□□□□ -0.5
KPNB1-201ENST00000290158 NEFHP12036 1026 aa11.9□□□□□ -0.5
KPNB1-201ENST00000290158 ACSBG1Q96GR2 724 aa11.9□□□□□ -0.5
KPNB1-201ENST00000290158 GNAI2P04899 355 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms