RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 FAM208AQ9UK61 1670 aaKnown RBP9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 PTPRCP08575 1304 aa9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 NFAT5O94916 1531 aa9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 HTATSF1O43719 755 aaKnown RBP9.12□□□□□ -0.95
SPARCL1-201ENST00000282470 BECN1Q14457 450 aa9.12□□□□□ -0.95
SPARCL1-201ENST00000282470 MCM10Q7L590 875 aa9.12□□□□□ -0.95
SPARCL1-201ENST00000282470 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
SPARCL1-201ENST00000282470 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
SPARCL1-201ENST00000282470 MTHFSDQ2M296 383 aaKnown RBP9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 EYA1Q99502 592 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 ATP10DQ9P241 1426 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 CACNA1FO60840 1977 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 HOXC9P31274 260 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 AMPHP49418 695 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 NLRP6P59044 892 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
SPARCL1-201ENST00000282470 MED1Q15648 1581 aaPredicted RBP9.1□□□□□ -0.95
SPARCL1-201ENST00000282470 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 SOX12O15370 315 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 KRT24Q2M2I5 525 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 PLPPR3Q6T4P5 718 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 FOXO3O43524 673 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 RTF1Q92541 710 aaKnown RBP9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 BABAM1Q9NWV8 329 aa9.09□□□□□ -0.95
SPARCL1-201ENST00000282470 C22orf23Q9BZE7 217 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 MSH6P52701 1360 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 MAP3K5Q99683 1374 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 RBM25P49756 843 aaKnown RBP9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 ANTXR1Q9H6X2 564 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 DCTPP1Q9H773 170 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 SLIT3O75094 1523 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 LMO7Q8WWI1 1683 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 CAMTA1Q9Y6Y1 1673 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 ANKRD45Q5TZF3 282 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 RPAP2Q8IXW5 612 aaPredicted RBP9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 ABTB2Q8N961 1025 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 TBC1D2Q9BYX2 928 aa9.08□□□□□ -0.96
SPARCL1-201ENST00000282470 NPHP4O75161 1426 aaPredicted RBP9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 GNAT3A8MTJ3 354 aa9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 TSPYL4Q9UJ04 414 aa9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 KDM3BQ7LBC6 1761 aa9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 TRPM3Q9HCF6 1732 aaPredicted RBP9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 PXDNLA1KZ92 1463 aa9.07□□□□□ -0.96
SPARCL1-201ENST00000282470 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 CEP85Q6P2H3 762 aa9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 IP6K1Q92551 441 aa9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 MST1RQ04912 1400 aa9.06□□□□□ -0.96
SPARCL1-201ENST00000282470 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
SPARCL1-201ENST00000282470 CEMIPQ8WUJ3 1361 aa9.05□□□□□ -0.96
SPARCL1-201ENST00000282470 NCOA3Q9Y6Q9 1424 aa9.05□□□□□ -0.96
SPARCL1-201ENST00000282470 RGPD2P0DJD1 1756 aa9.05□□□□□ -0.96
SPARCL1-201ENST00000282470 CCT4P50991 539 aaKnown RBP9.05□□□□□ -0.96
SPARCL1-201ENST00000282470 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 KCNH5Q8NCM2 988 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 IL17REQ8NFR9 667 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 TUBGCP6Q96RT7 1819 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 OVOS2A0A0G2JMS6 1433 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 EIF5BO60841 1220 aaKnown RBP9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 SNX21Q969T3 373 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 MEIS3Q99687 375 aa9.04□□□□□ -0.96
SPARCL1-201ENST00000282470 FRAT2O75474 233 aaPredicted RBP9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 TAF7Q15545 349 aaPredicted RBP9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 CCDC30Q5VVM6 783 aa9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 G2E3Q7L622 706 aa9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 ADAMTS7Q9UKP4 1686 aa9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 ALS2Q96Q42 1657 aa9.03□□□□□ -0.96
SPARCL1-201ENST00000282470 CDC45O75419 566 aa9.02□□□□□ -0.96
SPARCL1-201ENST00000282470 GSPT1P15170 499 aaKnown RBP9.02□□□□□ -0.96
SPARCL1-201ENST00000282470 GSE1Q14687 1217 aa9.02□□□□□ -0.96
SPARCL1-201ENST00000282470 STK31Q9BXU1 1019 aa9.02□□□□□ -0.96
SPARCL1-201ENST00000282470 TTC22Q5TAA0 569 aa9.02□□□□□ -0.97
SPARCL1-201ENST00000282470 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
SPARCL1-201ENST00000282470 FLIIQ13045 1269 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 ESCO1Q5FWF5 840 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 KIF2CQ99661 725 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 HMMRO75330 724 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 PSME1Q06323 249 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 SLKQ9H2G2 1235 aaPredicted RBP9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 NBPF6Q5VWK0 638 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 NBPF4Q96M43 638 aa9.01□□□□□ -0.97
SPARCL1-201ENST00000282470 HOXB7P09629 217 aa9□□□□□ -0.97
SPARCL1-201ENST00000282470 DDIT3P35638 169 aa9□□□□□ -0.97
SPARCL1-201ENST00000282470 HSCBQ8IWL3 235 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms