RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
CPSF6-201ENST00000266679 USP6P35125 1406 aa16.32■□□□□ 0.2
CPSF6-201ENST00000266679 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
CPSF6-201ENST00000266679 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
CPSF6-201ENST00000266679 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
CPSF6-201ENST00000266679 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
CPSF6-201ENST00000266679 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
CPSF6-201ENST00000266679 FMN2Q9NZ56 1722 aa16.31■□□□□ 0.2
CPSF6-201ENST00000266679 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
CPSF6-201ENST00000266679 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
CPSF6-201ENST00000266679 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
CPSF6-201ENST00000266679 BRPF1P55201 1214 aaPredicted RBP16.3■□□□□ 0.2
CPSF6-201ENST00000266679 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
CPSF6-201ENST00000266679 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
CPSF6-201ENST00000266679 SOX12O15370 315 aa16.3■□□□□ 0.2
CPSF6-201ENST00000266679 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
CPSF6-201ENST00000266679 SULT6B1Q6IMI4 303 aa16.3■□□□□ 0.2
CPSF6-201ENST00000266679 SMC5Q8IY18 1101 aa16.3■□□□□ 0.2
CPSF6-201ENST00000266679 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
CPSF6-201ENST00000266679 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
CPSF6-201ENST00000266679 RGPD1P0DJD0 1748 aa16.29■□□□□ 0.2
CPSF6-201ENST00000266679 C8orf58Q8NAV2 365 aa16.29■□□□□ 0.2
CPSF6-201ENST00000266679 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
CPSF6-201ENST00000266679 C1orf115Q9H7X2 142 aa16.27■□□□□ 0.2
CPSF6-201ENST00000266679 BECN1Q14457 450 aa16.27■□□□□ 0.19
CPSF6-201ENST00000266679 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
CPSF6-201ENST00000266679 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
CPSF6-201ENST00000266679 ABCC4O15439 1325 aa16.26■□□□□ 0.19
CPSF6-201ENST00000266679 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
CPSF6-201ENST00000266679 NUCB1Q02818 461 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 LRRC59Q96AG4 307 aaKnown RBP16.25■□□□□ 0.19
CPSF6-201ENST00000266679 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
CPSF6-201ENST00000266679 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
CPSF6-201ENST00000266679 MCM10Q7L590 875 aa16.23■□□□□ 0.19
CPSF6-201ENST00000266679 PIK3C2AO00443 1686 aa16.23■□□□□ 0.19
CPSF6-201ENST00000266679 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
CPSF6-201ENST00000266679 CHMP4BQ9H444 224 aaKnown RBP16.22■□□□□ 0.19
CPSF6-201ENST00000266679 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
CPSF6-201ENST00000266679 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
CPSF6-201ENST00000266679 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
CPSF6-201ENST00000266679 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
CPSF6-201ENST00000266679 PXDNQ92626 1479 aa16.21■□□□□ 0.19
CPSF6-201ENST00000266679 MAP3K19Q56UN5 1328 aa16.21■□□□□ 0.19
CPSF6-201ENST00000266679 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
CPSF6-201ENST00000266679 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
CPSF6-201ENST00000266679 ARHGEF10O15013 1369 aa16.21■□□□□ 0.18
CPSF6-201ENST00000266679 AFF2P51816 1311 aa16.21■□□□□ 0.18
CPSF6-201ENST00000266679 FOXO3O43524 673 aa16.21■□□□□ 0.18
CPSF6-201ENST00000266679 ADAMTS2O95450 1211 aa16.21■□□□□ 0.18
CPSF6-201ENST00000266679 C8orf37Q96NL8 207 aa16.21■□□□□ 0.18
CPSF6-201ENST00000266679 SLKQ9H2G2 1235 aaPredicted RBP16.21■□□□□ 0.18
CPSF6-201ENST00000266679 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
CPSF6-201ENST00000266679 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
CPSF6-201ENST00000266679 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
CPSF6-201ENST00000266679 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
CPSF6-201ENST00000266679 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
CPSF6-201ENST00000266679 FLT4P35916 1363 aa16.19■□□□□ 0.18
CPSF6-201ENST00000266679 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
CPSF6-201ENST00000266679 SIRT2Q8IXJ6 389 aa16.18■□□□□ 0.18
CPSF6-201ENST00000266679 GCC1Q96CN9 775 aa16.18■□□□□ 0.18
CPSF6-201ENST00000266679 CHL1O00533 1208 aa16.18■□□□□ 0.18
CPSF6-201ENST00000266679 MARF1Q9Y4F3 1742 aaKnown RBP16.18■□□□□ 0.18
CPSF6-201ENST00000266679 CRB1P82279 1406 aa16.17■□□□□ 0.18
CPSF6-201ENST00000266679 NPHP3Q7Z494 1330 aa16.17■□□□□ 0.18
CPSF6-201ENST00000266679 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
CPSF6-201ENST00000266679 RGS12O14924 1447 aa16.16■□□□□ 0.18
CPSF6-201ENST00000266679 AMPHP49418 695 aa16.16■□□□□ 0.18
CPSF6-201ENST00000266679 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
CPSF6-201ENST00000266679 MTHFSDQ2M296 383 aaKnown RBP16.15■□□□□ 0.18
CPSF6-201ENST00000266679 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
CPSF6-201ENST00000266679 EP400Q96L91 3159 aa16.14■□□□□ 0.18
CPSF6-201ENST00000266679 PLEKHG5O94827 1062 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 NUTM2GQ5VZR2 741 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 GSE1Q14687 1217 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 ANKARQ7Z5J8 1434 aa16.14■□□□□ 0.17
CPSF6-201ENST00000266679 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
CPSF6-201ENST00000266679 NLRP6P59044 892 aa16.13■□□□□ 0.17
CPSF6-201ENST00000266679 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
CPSF6-201ENST00000266679 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
CPSF6-201ENST00000266679 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
CPSF6-201ENST00000266679 NGLY1Q96IV0 654 aa16.13■□□□□ 0.17
CPSF6-201ENST00000266679 EYA1Q99502 592 aa16.13■□□□□ 0.17
CPSF6-201ENST00000266679 ANTXR1Q9H6X2 564 aa16.13■□□□□ 0.17
CPSF6-201ENST00000266679 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
CPSF6-201ENST00000266679 KDRP35968 1356 aa16.12■□□□□ 0.17
CPSF6-201ENST00000266679 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
CPSF6-201ENST00000266679 TSPYL4Q9UJ04 414 aa16.11■□□□□ 0.17
CPSF6-201ENST00000266679 LRRC37A3O60309 1634 aa16.11■□□□□ 0.17
CPSF6-201ENST00000266679 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
CPSF6-201ENST00000266679 RXRBP28702 533 aa16.11■□□□□ 0.17
CPSF6-201ENST00000266679 ABCA3Q99758 1704 aa16.1■□□□□ 0.17
CPSF6-201ENST00000266679 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
CPSF6-201ENST00000266679 PTPRCP08575 1304 aa16.1■□□□□ 0.17
CPSF6-201ENST00000266679 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms