RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 CRB1P82279 1406 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 G2E3Q7L622 706 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
COMMD9-201ENST00000263401 ANKRD45Q5TZF3 282 aa13.19□□□□□ -0.3
COMMD9-201ENST00000263401 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
COMMD9-201ENST00000263401 F6X3S4 739 aa13.18□□□□□ -0.3
COMMD9-201ENST00000263401 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
COMMD9-201ENST00000263401 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
COMMD9-201ENST00000263401 PSME1Q06323 249 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 APBB1O00213 710 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 NUCB1Q02818 461 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
COMMD9-201ENST00000263401 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
COMMD9-201ENST00000263401 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
COMMD9-201ENST00000263401 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
COMMD9-201ENST00000263401 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
COMMD9-201ENST00000263401 RGS12O14924 1447 aa13.16□□□□□ -0.3
COMMD9-201ENST00000263401 KDRP35968 1356 aa13.16□□□□□ -0.3
COMMD9-201ENST00000263401 SLC4A10Q6U841 1118 aa13.16□□□□□ -0.3
COMMD9-201ENST00000263401 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
COMMD9-201ENST00000263401 MSH6P52701 1360 aa13.15□□□□□ -0.3
COMMD9-201ENST00000263401 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
COMMD9-201ENST00000263401 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
COMMD9-201ENST00000263401 LTN1O94822 1766 aa13.15□□□□□ -0.3
COMMD9-201ENST00000263401 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 MEIS3Q99687 375 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 RGPD2P0DJD1 1756 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 ADAMTSL3P82987 1691 aa13.14□□□□□ -0.31
COMMD9-201ENST00000263401 SLKQ9H2G2 1235 aaPredicted RBP13.14□□□□□ -0.31
COMMD9-201ENST00000263401 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-201ENST00000263401 TBC1D32Q96NH3 1257 aa13.13□□□□□ -0.31
COMMD9-201ENST00000263401 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-201ENST00000263401 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
COMMD9-201ENST00000263401 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
COMMD9-201ENST00000263401 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-201ENST00000263401 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-201ENST00000263401 OTUD7AQ8TE49 926 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-201ENST00000263401 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
COMMD9-201ENST00000263401 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
COMMD9-201ENST00000263401 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
COMMD9-201ENST00000263401 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
COMMD9-201ENST00000263401 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
COMMD9-201ENST00000263401 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
COMMD9-201ENST00000263401 INTS3Q68E01 1043 aaKnown RBP13.1□□□□□ -0.31
COMMD9-201ENST00000263401 KCNQ3O43525 872 aa13.1□□□□□ -0.31
COMMD9-201ENST00000263401 IP6K1Q92551 441 aa13.09□□□□□ -0.31
COMMD9-201ENST00000263401 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
COMMD9-201ENST00000263401 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
COMMD9-201ENST00000263401 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
COMMD9-201ENST00000263401 NFAT5O94916 1531 aa13.09□□□□□ -0.31
COMMD9-201ENST00000263401 FRAT2O75474 233 aaPredicted RBP13.09□□□□□ -0.31
COMMD9-201ENST00000263401 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
COMMD9-201ENST00000263401 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.31
COMMD9-201ENST00000263401 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.31
COMMD9-201ENST00000263401 ATP10DQ9P241 1426 aa13.08□□□□□ -0.31
COMMD9-201ENST00000263401 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
COMMD9-201ENST00000263401 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
COMMD9-201ENST00000263401 GCP02774 474 aa13.08□□□□□ -0.32
COMMD9-201ENST00000263401 ANXA1P04083 346 aa13.08□□□□□ -0.32
COMMD9-201ENST00000263401 MPRIPQ6WCQ1 1025 aa13.08□□□□□ -0.32
COMMD9-201ENST00000263401 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
COMMD9-201ENST00000263401 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
COMMD9-201ENST00000263401 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
COMMD9-201ENST00000263401 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
COMMD9-201ENST00000263401 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
COMMD9-201ENST00000263401 GSPT1P15170 499 aaKnown RBP13.06□□□□□ -0.32
COMMD9-201ENST00000263401 HSPA2P54652 639 aa13.06□□□□□ -0.32
COMMD9-201ENST00000263401 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
COMMD9-201ENST00000263401 FLIIQ13045 1269 aa13.06□□□□□ -0.32
COMMD9-201ENST00000263401 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
COMMD9-201ENST00000263401 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-201ENST00000263401 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 PTPRCP08575 1304 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 TSHZ3Q63HK5 1081 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 KRT28Q7Z3Y7 464 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-201ENST00000263401 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-201ENST00000263401 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
COMMD9-201ENST00000263401 CHMP4BQ9H444 224 aaKnown RBP13.05□□□□□ -0.32
COMMD9-201ENST00000263401 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
COMMD9-201ENST00000263401 PXDNQ92626 1479 aa13.04□□□□□ -0.32
COMMD9-201ENST00000263401 ANKRD24Q8TF21 1146 aa13.04□□□□□ -0.32
COMMD9-201ENST00000263401 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 BECN1Q14457 450 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 FAM208AQ9UK61 1670 aaKnown RBP13.03□□□□□ -0.32
COMMD9-201ENST00000263401 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
COMMD9-201ENST00000263401 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms