RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 CEP57L1Q8IYX8 460 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 CTDP1Q9Y5B0 961 aaPredicted RBP18.76■□□□□ 0.59
SHTN1-201ENST00000260777 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 TRIM22Q8IYM9 498 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 MAGEC2Q9UBF1 373 aaPredicted RBP18.76■□□□□ 0.59
SHTN1-201ENST00000260777 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 EPS15P42566 896 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 CNNM1Q9NRU3 951 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 OFD1O75665 1012 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 CTNNA3Q9UI47 895 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
SHTN1-201ENST00000260777 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
SHTN1-201ENST00000260777 TRIM27P14373 513 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
SHTN1-201ENST00000260777 DISP3Q9P2K9 1392 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 CDKL5O76039 1030 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 MAP3K11Q16584 847 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
SHTN1-201ENST00000260777 CABP4P57796 275 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
SHTN1-201ENST00000260777 NACAP1Q9BZK3 213 aa18.74■□□□□ 0.59
SHTN1-201ENST00000260777 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
SHTN1-201ENST00000260777 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
SHTN1-201ENST00000260777 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
SHTN1-201ENST00000260777 CCDC43Q96MW1 224 aaKnown RBP18.73■□□□□ 0.59
SHTN1-201ENST00000260777 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
SHTN1-201ENST00000260777 MPNDQ8N594 471 aa18.73■□□□□ 0.59
SHTN1-201ENST00000260777 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
SHTN1-201ENST00000260777 PPFIBP1Q86W92 1011 aa18.72■□□□□ 0.59
SHTN1-201ENST00000260777 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 CCDC183Q5T5S1 534 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 TBC1D32Q96NH3 1257 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
SHTN1-201ENST00000260777 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
SHTN1-201ENST00000260777 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 MCM10Q7L590 875 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 IL16Q14005 1332 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
SHTN1-201ENST00000260777 SH2B1Q9NRF2 756 aaPredicted RBP18.71■□□□□ 0.59
SHTN1-201ENST00000260777 MYL6BP14649 208 aa18.7■□□□□ 0.58
SHTN1-201ENST00000260777 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
SHTN1-201ENST00000260777 SSFA2P28290 1259 aa18.7■□□□□ 0.58
SHTN1-201ENST00000260777 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
SHTN1-201ENST00000260777 UPF3BQ9BZI7 483 aaKnown RBP18.7■□□□□ 0.58
SHTN1-201ENST00000260777 ZNHIT6Q9NWK9 470 aaKnown RBP18.7■□□□□ 0.58
SHTN1-201ENST00000260777 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
SHTN1-201ENST00000260777 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
SHTN1-201ENST00000260777 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
SHTN1-201ENST00000260777 PTPRCP08575 1304 aa18.69■□□□□ 0.58
SHTN1-201ENST00000260777 IGHDP01880 384 aa18.69■□□□□ 0.58
SHTN1-201ENST00000260777 PROSER2Q86WR7 435 aaPredicted RBP18.69■□□□□ 0.58
SHTN1-201ENST00000260777 CDK5RAP3Q96JB5 506 aa18.69■□□□□ 0.58
SHTN1-201ENST00000260777 MYO6Q9UM54 1294 aa18.68■□□□□ 0.58
SHTN1-201ENST00000260777 LEKR1Q6ZMV7 388 aa18.68■□□□□ 0.58
SHTN1-201ENST00000260777 SCAND2PQ9GZW5 306 aaPredicted RBP18.68■□□□□ 0.58
SHTN1-201ENST00000260777 CEP126Q9P2H0 1117 aa18.68■□□□□ 0.58
SHTN1-201ENST00000260777 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
SHTN1-201ENST00000260777 CCDC83Q8IWF9 413 aa18.68■□□□□ 0.58
SHTN1-201ENST00000260777 STIM1Q13586 685 aa18.67■□□□□ 0.58
SHTN1-201ENST00000260777 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
SHTN1-201ENST00000260777 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
SHTN1-201ENST00000260777 NOL7Q9UMY1 257 aaKnown RBP18.67■□□□□ 0.58
SHTN1-201ENST00000260777 FKBP4Q02790 459 aaKnown RBP eCLIP18.67■□□□□ 0.58
SHTN1-201ENST00000260777 PRPF40BQ6NWY9 871 aaKnown RBP18.66■□□□□ 0.58
SHTN1-201ENST00000260777 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
SHTN1-201ENST00000260777 MTMR7Q9Y216 660 aa18.66■□□□□ 0.58
SHTN1-201ENST00000260777 UGGT2Q9NYU1 1516 aa18.66■□□□□ 0.58
SHTN1-201ENST00000260777 ERLIN1O75477 346 aa18.66■□□□□ 0.58
SHTN1-201ENST00000260777 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
SHTN1-201ENST00000260777 PATL2C9JE40 543 aaKnown RBP18.65■□□□□ 0.58
SHTN1-201ENST00000260777 KIF2AO00139 706 aaPredicted RBP18.65■□□□□ 0.58
SHTN1-201ENST00000260777 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
SHTN1-201ENST00000260777 WASF1Q92558 559 aa18.65■□□□□ 0.58
SHTN1-201ENST00000260777 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
SHTN1-201ENST00000260777 PDCL2Q8N4E4 241 aa18.65■□□□□ 0.58
SHTN1-201ENST00000260777 PTPRKQ15262 1439 aa18.65■□□□□ 0.58
SHTN1-201ENST00000260777 ADGRL1O94910 1474 aa18.65■□□□□ 0.58
SHTN1-201ENST00000260777 FAM177BA6PVY3 158 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 CCAR1Q8IX12 1150 aaKnown RBP18.64■□□□□ 0.57
SHTN1-201ENST00000260777 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 LIMCH1Q9UPQ0 1083 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 IMMTQ16891 758 aaKnown RBP18.64■□□□□ 0.57
SHTN1-201ENST00000260777 WAPLQ7Z5K2 1190 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 NME9Q86XW9 330 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 TXLNBQ8N3L3 684 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 SLC26A8Q96RN1 970 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 ANKRD36BQ8N2N9 1353 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
SHTN1-201ENST00000260777 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
SHTN1-201ENST00000260777 LUC7LQ9NQ29 371 aaKnown RBP18.63■□□□□ 0.57
SHTN1-201ENST00000260777 PARD3Q8TEW0 1356 aa18.63■□□□□ 0.57
SHTN1-201ENST00000260777 ASXL1Q8IXJ9 1541 aa18.63■□□□□ 0.57
SHTN1-201ENST00000260777 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
SHTN1-201ENST00000260777 NUP160Q12769 1436 aa18.63■□□□□ 0.57
SHTN1-201ENST00000260777 EIF3JO75822 258 aaKnown RBP18.63■□□□□ 0.57
SHTN1-201ENST00000260777 NOS1P29475 1434 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms