RNA–Protein interactions for RNA: ENST00000248929.13

SGSM3-201, Transcript of small G protein signaling modulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGSM3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-201ENST00000248929 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.28
SGSM3-201ENST00000248929 CHL1O00533 1208 aa16.82■□□□□ 0.28
SGSM3-201ENST00000248929 C16orf71Q8IYS4 520 aaPredicted RBP16.82■□□□□ 0.28
SGSM3-201ENST00000248929 SLC4A10Q6U841 1118 aa16.82■□□□□ 0.28
SGSM3-201ENST00000248929 C14orf37Q86TY3 774 aa16.82■□□□□ 0.28
SGSM3-201ENST00000248929 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
SGSM3-201ENST00000248929 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
SGSM3-201ENST00000248929 KNDC1Q76NI1 1749 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 BMP2KLQ5H9B9 411 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 HSCBQ8IWL3 235 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 AKAP12Q02952 1782 aa16.81■□□□□ 0.28
SGSM3-201ENST00000248929 F6X3S4 739 aa16.8■□□□□ 0.28
SGSM3-201ENST00000248929 NLRP6P59044 892 aa16.8■□□□□ 0.28
SGSM3-201ENST00000248929 TBC1D9Q6ZT07 1266 aa16.8■□□□□ 0.28
SGSM3-201ENST00000248929 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
SGSM3-201ENST00000248929 MEIS3Q99687 375 aa16.8■□□□□ 0.28
SGSM3-201ENST00000248929 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
SGSM3-201ENST00000248929 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
SGSM3-201ENST00000248929 OTUD7AQ8TE49 926 aaPredicted RBP16.8■□□□□ 0.28
SGSM3-201ENST00000248929 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
SGSM3-201ENST00000248929 EYA1Q99502 592 aa16.79■□□□□ 0.28
SGSM3-201ENST00000248929 G2E3Q7L622 706 aa16.79■□□□□ 0.28
SGSM3-201ENST00000248929 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
SGSM3-201ENST00000248929 GZF1Q9H116 711 aaPredicted RBP16.78■□□□□ 0.28
SGSM3-201ENST00000248929 MSH6P52701 1360 aa16.78■□□□□ 0.28
SGSM3-201ENST00000248929 PEAK1Q9H792 1746 aa16.78■□□□□ 0.28
SGSM3-201ENST00000248929 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
SGSM3-201ENST00000248929 KCNA6P17658 529 aa16.77■□□□□ 0.28
SGSM3-201ENST00000248929 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.27
SGSM3-201ENST00000248929 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
SGSM3-201ENST00000248929 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
SGSM3-201ENST00000248929 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
SGSM3-201ENST00000248929 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
SGSM3-201ENST00000248929 USP31Q70CQ4 1352 aa16.75■□□□□ 0.27
SGSM3-201ENST00000248929 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
SGSM3-201ENST00000248929 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
SGSM3-201ENST00000248929 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
SGSM3-201ENST00000248929 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
SGSM3-201ENST00000248929 RGS12O14924 1447 aa16.75■□□□□ 0.27
SGSM3-201ENST00000248929 RIMS1Q86UR5 1692 aaKnown RBP16.75■□□□□ 0.27
SGSM3-201ENST00000248929 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
SGSM3-201ENST00000248929 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 FLT4P35916 1363 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 CRB1P82279 1406 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 THEMISQ8N1K5 641 aaPredicted RBP16.74■□□□□ 0.27
SGSM3-201ENST00000248929 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
SGSM3-201ENST00000248929 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
SGSM3-201ENST00000248929 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
SGSM3-201ENST00000248929 KIF2CQ99661 725 aa16.73■□□□□ 0.27
SGSM3-201ENST00000248929 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
SGSM3-201ENST00000248929 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
SGSM3-201ENST00000248929 SBNO1A3KN83 1393 aa16.72■□□□□ 0.27
SGSM3-201ENST00000248929 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
SGSM3-201ENST00000248929 MCM4P33991 863 aa16.72■□□□□ 0.27
SGSM3-201ENST00000248929 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 CDC45O75419 566 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
SGSM3-201ENST00000248929 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
SGSM3-201ENST00000248929 PTPRCP08575 1304 aa16.7■□□□□ 0.26
SGSM3-201ENST00000248929 HOXC9P31274 260 aa16.7■□□□□ 0.26
SGSM3-201ENST00000248929 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SGSM3-201ENST00000248929 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
SGSM3-201ENST00000248929 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SGSM3-201ENST00000248929 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
SGSM3-201ENST00000248929 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
SGSM3-201ENST00000248929 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
SGSM3-201ENST00000248929 RPAP2Q8IXW5 612 aaPredicted RBP16.69■□□□□ 0.26
SGSM3-201ENST00000248929 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
SGSM3-201ENST00000248929 EXOC6BQ9Y2D4 811 aa16.68■□□□□ 0.26
SGSM3-201ENST00000248929 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
SGSM3-201ENST00000248929 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
SGSM3-201ENST00000248929 SDSP20132 328 aa16.67■□□□□ 0.26
SGSM3-201ENST00000248929 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
SGSM3-201ENST00000248929 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
SGSM3-201ENST00000248929 SNX21Q969T3 373 aa16.66■□□□□ 0.26
SGSM3-201ENST00000248929 KDRP35968 1356 aa16.66■□□□□ 0.26
SGSM3-201ENST00000248929 FLIIQ13045 1269 aa16.65■□□□□ 0.26
SGSM3-201ENST00000248929 TRAK2O60296 914 aa16.65■□□□□ 0.26
SGSM3-201ENST00000248929 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
SGSM3-201ENST00000248929 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
SGSM3-201ENST00000248929 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
SGSM3-201ENST00000248929 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.26
SGSM3-201ENST00000248929 TNPO1Q92973 898 aaKnown RBP16.64■□□□□ 0.25
SGSM3-201ENST00000248929 SLIT1O75093 1534 aa16.64■□□□□ 0.25
SGSM3-201ENST00000248929 K7ELQ4 463 aaPredicted RBP16.63■□□□□ 0.25
SGSM3-201ENST00000248929 HSPA2P54652 639 aa16.63■□□□□ 0.25
SGSM3-201ENST00000248929 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
SGSM3-201ENST00000248929 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
SGSM3-201ENST00000248929 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
SGSM3-201ENST00000248929 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
SGSM3-201ENST00000248929 HMMRO75330 724 aa16.62■□□□□ 0.25
SGSM3-201ENST00000248929 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
SGSM3-201ENST00000248929 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms